Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq28 122 7e-23
seq15 100 2e-16
seq20 91.5 1e-13
>seq28
Length=369090
Score = 122 bits (134), Expect = 7e-23
Identities = 293/436 (67%), Gaps = 13/436 (3%)
Strand=Plus/Plus
Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662
|| |||||| |||| ||||| || | ||| ||||||||| ||||| |||||||| ||
Sbjct 127008 GGGCATTCGTTGGGGCACATGAGAGTCCAGGCGCCGTTCTTCTCAACACGCTTCATGAAG 127067
Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT---TTTCTCTTCTGTACCC 131719
| |||||| | ||| | ||||| || || || | || || ||| | || ||
Sbjct 127068 AGATCCGGGATCCAGAGAGCGTAGAATAGGTCACGGGCACGGACTTCCTCCT-TG---CC 127123
Query 131720 ATAAtttttt-tCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACAC 131778
| || ||| |||| | | || || || | ||||||||||| || || | || |
Sbjct 127124 GTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCATGCCATGGCTCAACGTAGAT 127183
Query 131779 TGCCATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTA 131835
|| | || || ||||| ||| || || | ||| | | | |||||||| |
Sbjct 127184 GGCGAAAGCACCGGGTCGCTTGTTACCACCCTGGTCAACGTACCTCGCGGTGTTGTTGAA 127243
Query 131836 TACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCC 131895
||||| | |||||| | | |||||| | |||||||||||| | |||||| ||
Sbjct 127244 GACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCATTGGTACCGGCAATGTATGCACC 127303
Query 131896 ATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTG 131954
| |||| | ||| || | ||| | ||| |||||||| || || ||| ||||| | |
Sbjct 127304 AGTGGCACGGATACGATGGATGTTTAATCCGATACCTCCAGCAGTCTTT-GAGATCATGG 127362
Query 131955 CGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAA 132014
| ||| | | || |||| ||||||||| || | || ||| | |||||||| || |
Sbjct 127363 CACATGTCTTGAGCGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGA 127422
Query 132015 AGCAAGAGGACAACTG 132030
|||| || |||| |||
Sbjct 127423 AGCAGGATGACAGCTG 127438
>seq15
Length=1123021
Score = 100 bits (110), Expect = 2e-16
Identities = 162/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| || | | || ||||| || | || || || || || || ||||||||
Sbjct 653311 CCTCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 653252
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | |||| |||| |||||||| || || ||| | || || ||||| || ||||| ||
Sbjct 653251 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 653192
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || ||||||| || | | || | |||||| | | || ||
Sbjct 653191 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACC 653132
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253
|| || || |||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct 653131 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACTGC 653079
>seq20
Length=799479
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||| ||| | || || || || ||||| |||||||| || | |||| | || ||
Sbjct 288550 ACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 288491
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| ||||| || | || || ||||| || ||||| || | ||||||||||||
Sbjct 288490 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCTTTATCTTGA 288431
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| || | | | || | || || | | ||| || || || || || | |||
Sbjct 288430 ATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTG 288371
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||||| ||||| || ||||| || ||||||
Sbjct 288370 CCCGTAAGAGTCTTGACAAAAATCTGCATA 288341
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTG 27103
||||| ||| || || || || || ||||| || || | |||| | || ||||||||
Sbjct 288773 ATGTAGCGTCGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGGCCATCCTCGAGCTG 288714
Query 27104 TTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTT 27163
|| || ||| |||| || ||||| || ||||| || | |||||| ||||| ||||||
Sbjct 288713 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCTTGGATCTT 288654
Query 27164 GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223
|| | | | || | || || | | || ||||| || || || | || || ||
Sbjct 288653 AGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCAGT 288594
Query 27224 CAGAGTTTTCACAAAGATTTGCATA 27248
||||| || || ||||||||||||
Sbjct 288593 GAGAGTCTTGACGAAGATTTGCATA 288569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933970152296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |