Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq28 122 7e-23 seq15 100 2e-16 seq20 91.5 1e-13 >seq28 Length=369090 Score = 122 bits (134), Expect = 7e-23 Identities = 293/436 (67%), Gaps = 13/436 (3%) Strand=Plus/Plus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 || |||||| |||| ||||| || | ||| ||||||||| ||||| |||||||| || Sbjct 127008 GGGCATTCGTTGGGGCACATGAGAGTCCAGGCGCCGTTCTTCTCAACACGCTTCATGAAG 127067 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT---TTTCTCTTCTGTACCC 131719 | |||||| | ||| | ||||| || || || | || || ||| | || || Sbjct 127068 AGATCCGGGATCCAGAGAGCGTAGAATAGGTCACGGGCACGGACTTCCTCCT-TG---CC 127123 Query 131720 ATAAtttttt-tCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACAC 131778 | || ||| |||| | | || || || | ||||||||||| || || | || | Sbjct 127124 GTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCATGCCATGGCTCAACGTAGAT 127183 Query 131779 TGCCATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTA 131835 || | || || ||||| ||| || || | ||| | | | |||||||| | Sbjct 127184 GGCGAAAGCACCGGGTCGCTTGTTACCACCCTGGTCAACGTACCTCGCGGTGTTGTTGAA 127243 Query 131836 TACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCC 131895 ||||| | |||||| | | |||||| | |||||||||||| | |||||| || Sbjct 127244 GACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCATTGGTACCGGCAATGTATGCACC 127303 Query 131896 ATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTG 131954 | |||| | ||| || | ||| | ||| |||||||| || || ||| ||||| | | Sbjct 127304 AGTGGCACGGATACGATGGATGTTTAATCCGATACCTCCAGCAGTCTTT-GAGATCATGG 127362 Query 131955 CGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAA 132014 | ||| | | || |||| ||||||||| || | || ||| | |||||||| || | Sbjct 127363 CACATGTCTTGAGCGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGA 127422 Query 132015 AGCAAGAGGACAACTG 132030 |||| || |||| ||| Sbjct 127423 AGCAGGATGACAGCTG 127438 >seq15 Length=1123021 Score = 100 bits (110), Expect = 2e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | | || ||||| || | || || || || || || |||||||| Sbjct 653311 CCTCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 653252 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| |||| |||||||| || || ||| | || || ||||| || ||||| || Sbjct 653251 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 653192 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| || | | || | |||||| | | || || Sbjct 653191 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACC 653132 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 || || || |||| ||||||||||| || ||||| ||||||||||| |||| Sbjct 653131 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACTGC 653079 >seq20 Length=799479 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||| ||| | || || || || ||||| |||||||| || | |||| | || || Sbjct 288550 ACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 288491 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| ||||| || | || || ||||| || ||||| || | |||||||||||| Sbjct 288490 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCTTTATCTTGA 288431 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | | || | || || | | ||| || || || || || | ||| Sbjct 288430 ATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTG 288371 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||| ||||| || ||||| || |||||| Sbjct 288370 CCCGTAAGAGTCTTGACAAAAATCTGCATA 288341 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTG 27103 ||||| ||| || || || || || ||||| || || | |||| | || |||||||| Sbjct 288773 ATGTAGCGTCGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGGCCATCCTCGAGCTG 288714 Query 27104 TTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTT 27163 || || ||| |||| || ||||| || ||||| || | |||||| ||||| |||||| Sbjct 288713 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCTTGGATCTT 288654 Query 27164 GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223 || | | | || | || || | | || ||||| || || || | || || || Sbjct 288653 AGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCAGT 288594 Query 27224 CAGAGTTTTCACAAAGATTTGCATA 27248 ||||| || || |||||||||||| Sbjct 288593 GAGAGTCTTGACGAAGATTTGCATA 288569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933970152296