Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq28 255 7e-63 seq3 136 5e-27 seq71 132 6e-26 seq25 86.0 8e-12 >seq28 Length=369090 Score = 255 bits (282), Expect = 7e-63 Identities = 1168/1816 (64%), Gaps = 55/1816 (3%) Strand=Plus/Plus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGA 110421 ||||| |||||||| ||||||||||| || | ||||| || || | ||||| || | Sbjct 125856 CGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCA-GCCAGCAAAGTGCATGGATGT 125914 Query 110422 GAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATG 110479 || |||| ||| ||||| | |||| || ||| | ||| |||| | || ||| Sbjct 125915 GATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACT--GATCGATG 125972 Query 110480 AAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCA-TCTTA-ATTTCCCAAACTG 110537 ||| || || | |||||||| | | || | | | | | || ||||| || | Sbjct 125973 AAGGCTCCACGGTCAGCCGCCATCTGGACGA--TGGTGCGCTGGGAGATCTCCCAGACGG 126030 Query 110538 TGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCG 110597 | ||||| |||||| || | ||||| | | ||||||||||||||| || || Sbjct 126031 TCTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATATTCTGGATGGAGCCTCCGT 126090 Query 110598 CCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGA 110657 || | ||| | | |||||| | | ||||| || || || | ||||| |||| Sbjct 126091 CCGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAGGTCCTTGA 126150 Query 110658 ----CGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATG 110713 | ||| | || || | ||||| || || ||| | | | ||||||| Sbjct 126151 GCAACCAGGGG----TTAACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATG 126206 Query 110714 TTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTT 110773 || | |||||||| |||||||| || || || | || || | |||||| || || Sbjct 126207 TTGGAGGTGTATGGCTCAAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTG 126266 Query 110774 GGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGA 110833 ||||| ||||| | | ||| ||| || | ||| | || |||||| || |||||||| Sbjct 126267 GGCATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCCGAACCTTGAGA 126326 Query 110834 ACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCC 110892 |||||||| | | | | || | || ||||||| || | || ||| | || Sbjct 126327 GAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGC-CCCACATATCGTATTGGAGCTCGCC 126385 Query 110893 TTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACA 110952 | |||| | || || ||||| | || || || | || || | |||| || Sbjct 126386 CTTGGACACTGGCGATCCCTCGTACGTCTCGTACGTGCCGTGAATCTGGGCCAGCTCCAC 126445 Query 110953 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 111012 | || || | |||| || ||||| |||||||| | | || | |||||| Sbjct 126446 GGAGGCAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGAACTTGGC 126505 Query 111013 TTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACAC 111071 || ||||| || | | || | | | | ||| |||| || ||||| || |||| Sbjct 126506 CTCGGGAGAATCGAAGG-GAAGGCGAAGAGCCAGGAATGCATCAGCAAGACCCTGGACAC 126564 Query 111072 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGC---GCAGTCTCAACGGGATAAA 111128 | | ||| || ||||| || | || | ||| || ||| ||||| || Sbjct 126565 CAACGGCAACTGGCCTGTGACGGAAGTTGC---TGCGCCTGGCCTCCTCGACGGGGTAGT 126621 Query 111129 AATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTT 111188 | || |||||||| ||| | || || ||||| || ||||| |||||||| | Sbjct 126622 AGTTGACGTCAATGATCTTGTTCAAGTTCTTAACAACAACCTGTGTGACCTCATGAAGCT 126681 Query 111189 TTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCA 111248 | | | ||| | |||| | | | || ||| | || ||||| | ||||||| Sbjct 126682 TCTGGAAGTCATATGTGCCGTTGGCCATGTCAACGTACGTCGGCAGGGCAAGAGATGCCA 126741 Query 111249 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGG 111308 | || || || ||| ||||||| | | |||||| | || ||||| || | ||||| Sbjct 126742 AGTTACACACGGCCACCTCATCCGGGGCAGAGTACTCGACGATCTCTGTGCACAGGTTGG 126801 Query 111309 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGA 111368 | || || || || | ||||| ||||| ||||| |||||| |||||||| || | Sbjct 126802 AGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTATACA 126861 Query 111369 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCG 111427 |||| | || | || ||||| ||||| || | ||| || | | ||||| | || | | Sbjct 126862 ACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGGATGGAGTACCAAAGCTTCTGGG 126921 Query 111428 GCTGGTACAATGGCGTTGG--CCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 111484 || | |||| ||| ||| | |||||| |||||| |||||| || ||| Sbjct 126922 CCTTG----ATGGTCTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCA 126977 Query 111485 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCA 111543 ||||| || || |||| | | || || || || || || || | |||| ||| Sbjct 126978 AACTCATCGCCGTAGACGTCCGCCAATCCAGG-GCATTCGTTGGGGCACATGAGAGTCCA 127036 Query 111544 TTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAG 111601 | | | ||| |||||| ||||||||||| || || || ||||| || | | || Sbjct 127037 --GGCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAAT 127094 Query 111602 AGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCAT 111660 || || | ||| || | || || | || ||||| || || || |||||||| | Sbjct 127095 AGGTCACGGGCACGGA-CTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAA 127153 Query 111661 GATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC---CCAGC 111717 || |||||| ||||||||||||| |||| |||| || || ||| ||| | Sbjct 127154 GACATCCGCATGCCATGGCTCAACGTAGATGGCGAAAGCACCGGGTCGCTTGTTACCACC 127213 Query 111718 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 111777 || | || || | ||| ||| ||| || ||||| ||||| |||| ||||| | || Sbjct 127214 CTGGTCAACGTACCTCGCGGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGA 127273 Query 111778 TTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCC 111837 | ||||| || || ||| | | |||| | | | |||||||| | || Sbjct 127274 GTTTCCATTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATGTTTAATCC 127333 Query 111838 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 111897 ||||| ||||| ||||||||| ||||| | | || || |||||||||| | Sbjct 127334 GATACCTCCAGCAGTCTTTGAGATCATGGCACATGTCTTGAGCGTGTCATAGATACCCTC 127393 Query 111898 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTAC 111956 || |||||||| || ||| | |||||| |||| ||| || || |||||||| Sbjct 127394 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG-GGCCTGTGGTGTAC 127452 Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTA 112014 ||||||||||||| ||||| | ||||| |||| || |||| ||||| || ||| Sbjct 127453 CAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTA 127510 Query 112015 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACAT 112074 |||||| ||||| || || ||||| ||||| | || || ||||| | ||| Sbjct 127511 TGTCTCGGTTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCAT 127570 Query 112075 GTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGG 112133 || |||||| | || | ||||||| || || ||||||| | || |||||| | Sbjct 127571 GTGCTGTGGTCTCTCAGCAACCTTGCCATCAAGGCGGAGAAGATACGATC-GCTCAAGAG 127629 Query 112134 TTTTGAGACCAAAGTA 112149 | |||| || ||||| Sbjct 127630 TCTTGAAGCCGAAGTA 127645 >seq3 Length=1861714 Score = 136 bits (150), Expect = 5e-27 Identities = 339/509 (67%), Gaps = 7/509 (1%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || ||||| || || || || |||||| || || | |||||| || Sbjct 165207 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCGGCCATGAGGCC 165148 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| |||| | | ||| || |||||||||||||||||||| || Sbjct 165147 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 165088 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || |||| ||||| | ||||||| | | ||| | | | ||| | | ||| Sbjct 165087 GGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGTCTTGGATCCACCTAACTGC 165028 Query 122850 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 122909 ||| | |||||||||| ||| || || | || | |||||| | || | | | Sbjct 165027 CCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGCG 164968 Query 122910 TTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT 122969 || || | ||||| |||||| |||| || | || ||||| ||| | |||| | Sbjct 164967 TTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTT 164908 Query 122970 TTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCG 123028 || || || | ||| | ||||||| |||| ||||| || || ||||| | | Sbjct 164907 CTCTATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCTG 164850 Query 123029 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 123087 | || | | || |||||| |||||||| || ||| | || ||||| || || Sbjct 164849 CTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAGA 164790 Query 123088 ATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATCT 123144 | || ||||| | |||| ||||| | || | |||||||||| ||| || Sbjct 164789 ACGTGGGAAATGAAGTAACGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCC 164730 Query 123145 TTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||||| | ||||| || || || ||||| Sbjct 164729 TTGGAGAGATCAATCTCCTCTGCCGTCCA 164701 Score = 136 bits (150), Expect = 5e-27 Identities = 339/509 (67%), Gaps = 7/509 (1%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || ||||| || || || || |||||| || || | |||||| || Sbjct 175063 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCGGCCATGAGGCC 175004 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| |||| | | ||| || |||||||||||||||||||| || Sbjct 175003 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 174944 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || |||| ||||| | ||||||| | | ||| | | | ||| | | ||| Sbjct 174943 GGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGTCTTGGATCCACCTAACTGC 174884 Query 122850 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 122909 ||| | |||||||||| ||| || || | || | |||||| | || | | | Sbjct 174883 CCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGCG 174824 Query 122910 TTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT 122969 || || | ||||| |||||| |||| || | || ||||| ||| | |||| | Sbjct 174823 TTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTT 174764 Query 122970 TTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCG 123028 || || || | ||| | ||||||| |||| ||||| || || ||||| | | Sbjct 174763 CTCTATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCTG 174706 Query 123029 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 123087 | || | | || |||||| |||||||| || ||| | || ||||| || || Sbjct 174705 CTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAGA 174646 Query 123088 ATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATCT 123144 | || ||||| | |||| ||||| | || | |||||||||| ||| || Sbjct 174645 ACGTGGGAAATGAAGTAACGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCC 174586 Query 123145 TTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||||| | ||||| || || || ||||| Sbjct 174585 TTGGAGAGATCAATCTCCTCTGCCGTCCA 174557 >seq71 Length=14946 Score = 132 bits (146), Expect = 6e-26 Identities = 339/509 (67%), Gaps = 8/509 (2%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || ||||| || || || || |||||| || || | |||||| || Sbjct 12523 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCGGCCATGAGGCC 12582 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| |||| | | ||| || |||||||||||||||||||| || Sbjct 12583 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAAC-GG 12641 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || |||| ||||| | ||||||| | | ||| | | | ||| | | ||| Sbjct 12642 GGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGTCTTGGATCCACCTAACTGC 12701 Query 122850 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 122909 ||| | |||||||||| ||| || || | || | |||||| | || | | | Sbjct 12702 CCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGCG 12761 Query 122910 TTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT 122969 || || | ||||| |||||| |||| || | || ||||| ||| | |||| | Sbjct 12762 TTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTT 12821 Query 122970 TTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCG 123028 || || || | ||| | ||||||| |||| ||||| || || ||||| | | Sbjct 12822 CTCTATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCTG 12879 Query 123029 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 123087 | || | | || |||||| |||||||| || ||| | || ||||| || || Sbjct 12880 CTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAGA 12939 Query 123088 ATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATCT 123144 | || ||||| | |||| ||||| | || | |||||||||| ||| || Sbjct 12940 ACGTGGGAAATGAAGTAACGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCC 12999 Query 123145 TTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||||| | ||||| || || || ||||| Sbjct 13000 TTGGAGAGATCAATCTCCTCTGCCGTCCA 13028 >seq25 Length=557695 Score = 86.0 bits (94), Expect = 8e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||| ||||| | |||| || || || || |||||| ||||| | |||||| || Sbjct 29570 GTGGAGGCCCTCGTTATGGGATATGAGCTCGTTCGAGAAGGTCAGACCAGCCATGAGGCC 29629 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 122786 ||||| || | ||| |||||| | ||| || |||||||||||||||||||| || Sbjct 29630 ACGCTTGTTGAGCCAGAAAATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAAC 29686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031348416800