Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq28 271 9e-68 seq3 136 5e-27 seq71 132 6e-26 seq25 127 2e-24 >seq28 Length=369090 Score = 271 bits (300), Expect = 9e-68 Identities = 908/1390 (65%), Gaps = 25/1390 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| | ||||| || || | || ||||| || || || ||||| Sbjct 127579 CCACAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGCGAGGATATTGAGAAGACA 127520 Query 104282 TTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 ||||||||| || ||||| |||| || |||| ||||| | ||||| |||| Sbjct 127519 ACCGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCTTCCCCAACACTCT 127462 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 ||||||||||||||||| |||| |||| |||||| | ||| || ||||||| Sbjct 127461 TCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGACATGAAGGAGG 127402 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 | || | |||||||||| || || | | ||||| ||||||||| |||| Sbjct 127401 ATAGTATTGAGGGTATCTATGACACGCTCAAGACATGTGCCATGATCTCAAAGACTGCTG 127342 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | ||||| || | |||||||| | | | |||| | | ||| || || | Sbjct 127341 GAGGTATCGGATTAAACATCCATCGTATCCGTGCCACTGGTGCATACATTGCCGGTACCA 127282 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 |||| | || | ||||| |||| ||||| ||||| || ||| ||| ||| | || | Sbjct 127281 ATGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACCGCGAGGTACG 127222 Query 104580 TAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636 | | || | ||| ||| || || |||| |||| ||||||||||||| | Sbjct 127221 TTGACCAGGGTGGTAACAAGCGACCCGGTGCTTTCGCCATCTACGTTGAGCCATGGCATG 127162 Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC 104696 ||||| || | |||||||| || ||| | ||||| || | ||||| | || || Sbjct 127161 CGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGCAAGGAGGAAGTCCGTGCCC 127102 Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 104756 | || || |||| |||||||||||| || ||||||||||||||| | |||||| ||| | Sbjct 127101 GTGACCTATTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGAAGAACG 127042 Query 104757 GCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAG 104815 || ||| ||||| | || || || || || ||||| | | || | | || || Sbjct 127041 GCGCCTGGACTCTCATGTGCCCCAACGAATGC-CCTGGATTGGCGGACGTCTACGGCGAT 126983 Query 104816 GAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGTGC 104873 |||||||| || || ||| |||||| | || ||| || | | || ||| | | Sbjct 126982 GAGTTTGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGG-GTC-GCAAGACCAT-C 126926 Query 104874 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 || | || | | ||| | | || ||| ||||||| || ||||| || | || | | Sbjct 126925 AAGGCCCAGAAGCTTTGGTACTCCATCCTCGAGTCTCAGACTGAGACAGGAAACCCTTTC 126866 Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992 ||| | || || || || || |||| ||||| || || ||||| | ||| ||| Sbjct 126865 ATGTTGTATAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCCGC 126806 Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052 || ||||| || || ||||| ||| | || | | | | |||||| ||| |||||| Sbjct 126805 AGCTCCAACCTGTGCACAGAGATCGTCGAGTACTCTGCCCCGGATGAGGTGGCCGTGTGT 126746 Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACATTTGATT 105110 ||| | ||||| | || || || | ||| || || || | ||| | |||| ||| | Sbjct 126745 AACTTGGCATCTCTTGCCCTGCCGACGTACGTTGA--CATGGCCAACGGCACATATGACT 126688 Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170 | || || || || || || | ||| || ||| | |||| | ||||| Sbjct 126687 TCCAGAAGCTTCATGAGGTCACACAGGTTGTTGTTAAGAACTTGAACAAGATCATTGACG 126628 Query 105171 GAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 105230 || | |||||||| ||| || | || | | ||| | ||| ||| Sbjct 126627 TCAACTACTACCCCGTCGAGGAGGCCAGGCGCAGCAACTTCCGTCACAGGCCAGTTGCCG 126568 Query 105231 TCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACG 105290 | ||||| |||||||| || |||| |||| | | ||||| | || ||||| || Sbjct 126567 TTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCTCTTCGCCTTCCCTTCGATTCTCCCG 126508 Query 105291 AAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-GGCG 105349 | || ||| |||| | | || ||||||||||| || |||| ||| |||| || Sbjct 126507 AGGCCAAGTTCCTCAACTCCCAGATCTTTGAGACCATCTACCACGGTGCT-TTGACTGCC 126449 Query 105350 AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 105409 ||| |||| || || | || | || || || | ||||| || |||| || Sbjct 126448 TCCGTGGAGCTGGCCCAGATTCACGGCACGTACGAGACGTACGAGGGATCGCCAGTGTC- 126390 Query 105410 CAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGG 105467 |||||| | ||| |||| |||||||||| || | || | | | | ||||||| Sbjct 126389 CAAGGGCGAGCTCCAATACGATATGTGGG-GCGTTACTCCTACCGACCTGTGGGACTGGG 126331 Query 105468 AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAA 105527 | ||||||||| || |||||| || | ||| | || ||| ||| ||| | || || | Sbjct 126330 ACTCTCTCAAGGTTCGGATCAAGCAGCACGGTGTCCGCAACTCTCTGCTCGTTGCACCCA 126271 Query 105528 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587 |||| || || |||||| | || || | || || || |||||||| || ||||| Sbjct 126270 TGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTCAACGAGTGCTTTGAGCCATACACCT 126211 Query 105588 CGAACATCTA 105597 | |||||||| Sbjct 126210 CCAACATCTA 126201 >seq3 Length=1861714 Score = 136 bits (150), Expect = 5e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | |||||| | || |||| || ||| | ||||| || || ||||| | | | Sbjct 164977 CTCTTCAATGCCATCGAGACCATTCCTTGCATTAAGAAGAAGGCCGACTGGGCAGTTAGG 165036 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | |||| | | |||| ||| |||| ||| | || || || ||||| Sbjct 165037 TGGATCCAAGACAAGGATTCCA-CCTTCGCTCAGCGCCTCGTTGCCTTCGCCGCCGTTGA 165095 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||||||||||||||| || |||||| | | |||| |||||||||||||| || ||||| Sbjct 165096 GGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCAT 165155 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 | | || || |||||| |||||||| ||||| ||||||||||| |||||| Sbjct 165156 GGCCGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGACGAGGGTCTCCAC 165207 Score = 136 bits (150), Expect = 5e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | |||||| | || |||| || ||| | ||||| || || ||||| | | | Sbjct 174833 CTCTTCAATGCCATCGAGACCATTCCTTGCATTAAGAAGAAGGCCGACTGGGCAGTTAGG 174892 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | |||| | | |||| ||| |||| ||| | || || || ||||| Sbjct 174893 TGGATCCAAGACAAGGATTCCA-CCTTCGCTCAGCGCCTCGTTGCCTTCGCCGCCGTTGA 174951 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||||||||||||||| || |||||| | | |||| |||||||||||||| || ||||| Sbjct 174952 GGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCAT 175011 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 | | || || |||||| |||||||| ||||| ||||||||||| |||||| Sbjct 175012 GGCCGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGACGAGGGTCTCCAC 175063 >seq71 Length=14946 Score = 132 bits (146), Expect = 6e-26 Identities = 171/232 (74%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | |||||| | || |||| || ||| | ||||| || || ||||| | | | Sbjct 12752 CTCTTCAATGCCATCGAGACCATTCCTTGCATTAAGAAGAAGGCCGACTGGGCAGTTAGG 12693 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | |||| | | |||| ||| |||| ||| | || || || ||||| Sbjct 12692 TGGATCCAAGACAAGGATTCCA-CCTTCGCTCAGCGCCTCGTTGCCTTCGCCCC-GTTGA 12635 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||||||||||||||| || |||||| | | |||| |||||||||||||| || ||||| Sbjct 12634 GGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCAT 12575 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 | | || || |||||| |||||||| ||||| ||||||||||| |||||| Sbjct 12574 GGCCGGCCTGACCTTCTCGAACGAGCTCATCTCCCGTGACGAGGGTCTCCAC 12523 >seq25 Length=557695 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | ||||| | || |||| || || | ||||| || || ||||| | | | Sbjct 29800 CTCTTCAATGCCATTGAGACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCAGTTAGG 29741 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | |||| | | | |||||||| |||| ||| | || || || ||||| Sbjct 29740 TGGATACAAGACAAGGATTC-TACCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGA 29682 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||||||||||||||| || |||||| | |||||| |||||||| ||||| || ||||| Sbjct 29681 GGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATTTTCTGGCTCAACAAGCGTGGCCTCAT 29622 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 | | ||||| |||||| |||||||| || || | | ||||||| |||||| Sbjct 29621 GGCTGGTCTGACCTTCTCGAACGAGCTCATATCCCATAACGAGGGCCTCCAC 29570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260194866920