Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq20 172 2e-37
seq6 84.2 7e-11
>seq20
Length=799479
Score = 172 bits (190), Expect = 2e-37
Identities = 179/235 (76%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | ||||| ||||| || || ||||| || ||||| || |
Sbjct 288576 TTTGCATACCACCACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGT 288517
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||| || || || || ||||||||||| || || ||||| |
Sbjct 288516 AGTCCGACAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGT 288457
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||| || || |||||||| ||||| || | || || |||||||| | ||| ||||
Sbjct 288456 CCGGAGGGATACCCTCTTTATCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATG 288397
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || ||||| |||| ||||| || || || || || ||||||||||||||
Sbjct 288396 ATTCCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 288342
Score = 141 bits (156), Expect = 3e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | ||||||||||| || || ||||| || || || || |||||
Sbjct 288800 CATACCACCACGGAGGCGGAGAACAAGATGTAGCGTCGACTCCTTCTGGATGTTGTAATC 288741
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || ||||| || || || || || || || || || || ||||| || ||
Sbjct 288740 AGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGG 288681
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || || || ||||| || || |||| || || ||||| || | ||| || | ||
Sbjct 288680 AGGGATACCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTC 288621
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || |||| ||||||||| || || || || || || || |||||
Sbjct 288620 GACTTCCAGCGTAATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 288570
Score = 120 bits (132), Expect = 9e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | |||||||| ||||| || ||||| || || ||
Sbjct 288344 CATACCACCACGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTC 288285
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || ||||| || || ||||| || || || || ||||| || ||
Sbjct 288284 GGAGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGG 288225
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| || || || ||||| ||||| | || ||||| || || | || || | ||
Sbjct 288224 AGGAATGCCCTCCTTGTCCTGGATTTTCGACTTCACATTGTCGATGGTGTCGGACGACTC 288165
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || | || | ||||| || || || || || || || ||||||||
Sbjct 288164 AACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 288114
Score = 104 bits (114), Expect = 7e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|||||||| | | || || | ||||| || ||| || || || || || ||
Sbjct 289024 CCACCACGAAGGCGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 288965
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| || | |||||| || || || || ||||||||||| || || ||||| || || ||
Sbjct 288964 AGCGTCCTCCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGG 288905
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
|| || || ||||||||||| || | || || || ||||| | || || | |||||
Sbjct 288904 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACC 288845
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || |||| |||||||| || | || || || |||||||||||
Sbjct 288844 TCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 288798
Score = 89.7 bits (98), Expect = 2e-12
Identities = 146/208 (70%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | || || || || || || ||||| || || || || || ||
Sbjct 288116 CATACCACCGCGAAGACGAAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 288057
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || || ||||| || || || ||||| ||||||||||| || ||
Sbjct 288056 GGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGG 287997
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
|||||||| || || || || || || ||| || || || || || | ||| || | |
Sbjct 287996 GGGAATTCCCTCCTTGTCTTGGATCTT-GCTCTTGACGTTGTCGATGGTATCGGACGACT 287938
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| || || || || | ||||| || ||
Sbjct 287937 CGACCTCTAGGGTGATGGTCTTGCCCGT 287910
>seq6
Length=1702635
Score = 84.2 bits (92), Expect = 7e-11
Identities = 101/137 (74%), Gaps = 3/137 (2%)
Strand=Plus/Minus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| ||||||||| | || || ||| || || | ||||||||||| |||||||| ||
Sbjct 92959 CGCGGCACACCAAGGGTGACGTTC---TTGGACGACACACCAGCAAAATGGAAAGTGTTG 92903
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | || || | ||||||||||| ||||| || |||| || || ||||| ||
Sbjct 92902 AGCGTCATCTGTGTGGCAGGCTCACCAATAGACTGGGCGGCAAGAATACCGACCATCTCG 92843
Query 377578 CCAGGATTGACAATAGC 377594
|| || ||||| | |||
Sbjct 92842 CCGGGGTTGACCAGAGC 92826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515252788621649
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |