Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq28 214 2e-50 seq3 104 3e-17 seq71 100 3e-16 >seq28 Length=369090 Score = 214 bits (236), Expect = 2e-50 Identities = 479/712 (67%), Gaps = 22/712 (3%) Strand=Plus/Minus Query 53243 GAGACGTACGACTTAATGAG--CCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCA 53300 ||||| ||| || | ||| ||||| ||||| || ||||| | ||||| || |||| Sbjct 127516 GAGACATACAACCTCATGTCTTCCAAA--TACTTCACACACGCTTCCCCAACACTCTTCA 127459 Query 53301 ACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACT 53360 | |||||||| || | ||| |||| ||||||| |||| | |||||||| || Sbjct 127458 ATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGACATGAAGGAGGATA 127399 Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420 || || || ||||| || ||||||||| |||||| ||||| ||| | || | Sbjct 127398 GTATTGAGGGTATCTATGACACGCTCAAGACATGTGCCATGATCTCAAAGACTGCTGGAG 127339 Query 53421 GTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAA 53478 ||||||| | || | ||| | ||||||| | || || || || || || Sbjct 127338 GTATCGGATTAAACATCCATCGTA--TCCGTGCCACTGGTGCATACATTGCCGGTACCAA 127281 Query 53479 CGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGT 53538 || | | | || ||||| || ||||||||||||||||||||||| || ||||||| Sbjct 127280 TGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACCGCGAGGTACGT 127221 Query 53539 CAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGC 53598 ||||||||||| ||||| || | |||||||||||| | ||||| ||||| || Sbjct 127220 TGACCAGGGTGGTAACAAGCGACCCGGTGCTTTCGCCATCTACGTTGAGCCATGGCATGC 127161 Query 53599 CGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCG 53658 || | | ||||| || || || | ||| || || | || || | || ||| Sbjct 127160 GGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGCAAGGAGGAAGTCCGTGCCCG 127101 Query 53659 TGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717 |||||| || ||| ||||| ||||| ||||| ||||||||| | || |||||| ||| Sbjct 127100 TGACCTATTCTAC-GCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGAAGAACG 127042 Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGG 53777 | ||| || |||||||| ||||| ||||| || | || |||||||| || | Sbjct 127041 GCGCCTGGACTCTCATGTGCCCCAACGAATGCCCTGGATTGGCGGACGTCTACGGCGATG 126982 Query 53778 AGTTTAACGAGATGTA-TCGGAC-----GTACGCAGTTCAGGGCCGCTACAAGAAGAAGG 53831 ||||| | | | | || || | | | | | | |||| ||| |||| Sbjct 126981 AGTTTGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGC------AAGACCA 126928 Query 53832 TCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGT 53891 ||||||| | || | ||| | | |||||| || ||| ||||| |||| || | Sbjct 126927 TCAAGGCCCAGAAGCTTTGGTACTCCATCCTCGAGTCTCAGACTGAGACAGGAAACCCTT 126868 Query 53892 ACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 ||||| || |||||| | |||| |||||||||||||||||| |||| Sbjct 126867 TCATGTTGTATAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 126816 Score = 113 bits (124), Expect = 5e-20 Identities = 301/450 (67%), Gaps = 15/450 (3%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| |||||||| || || ||||| || || || || | ||||| | ||| | Sbjct 126295 CGCAACTCTCTGCTCGTTGCACCCATGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTC 126236 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| || ||||| ||||| ||||||||||| |||||| ||| || || ||| Sbjct 126235 AACGAGTGCTTTGAGCCATACACCTCCAACATCTACTCGCGCCGTGTCCTGGCCGGCGAG 126176 Query 55604 TTTGTCATGATCAACAAGCACCTCGT----CAAGGACCTGCAGAAGATCAACAAGTGGAA 55659 || || | || || | ||| || |||||||||| | || |||| Sbjct 126175 TTC--CAAG-TCGTTAACC-CCTGGTTGCTCAAGGACCTGGTCGACATGGGACTGTGGTC 126120 Query 55660 CCCGCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGAGAT- 55716 | || |||| || || | ||||| ||| || ||| |||||||| | | Sbjct 126119 TGACAACATGAAGAACCGCATCATC-GCGGA-CGGAGGCTCCATCCAGAATATCCCCAAC 126062 Query 55717 -TCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTG 55774 ||| | || | |||||| | ||| ||| || |||||||| | ||| | | Sbjct 126061 ATCCCCGCCGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGCACCATC 126002 Query 55775 ATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTC 55834 | | ||| ||||| ||||| || | |||||| ||||||||||| || |||||| | Sbjct 126001 GTCCAGATGGCGGCTGACCGTGGAGCCTTCATCGATCAGTCCCAGTCCCTCAACATCCAC 125942 Query 55835 ATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGA 55894 ||| || | || || ||| |||| | | || ||||||||| || |||||| || Sbjct 125941 ATGAAGGACCCAACAATGGGCAAGATCACATCCATGCACTTTGCTGGCTGGAAGCTCGGC 125882 Query 55895 CTCAAGACGGGTATGTACTATCTGCGGACC 55924 |||||||| || |||||||| || || ||| Sbjct 125881 CTCAAGACCGGCATGTACTACCTCCGCACC 125852 >seq3 Length=1861714 Score = 104 bits (114), Expect = 3e-17 Identities = 336/512 (66%), Gaps = 20/512 (4%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || ||||| || | ||||| | ||| || ||||||||||| | ||| || |||| | Sbjct 165179 TCGTTCGAGAAGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCG 165120 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 ||||| || ||||||||| || || || || ||||| || ||||| || ||||| Sbjct 165119 AAGGAGCCGGAGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAG 165060 Query 74910 GGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGG 74965 | | ||| ||| ||||| | ||||| || || || | | | | ||| | Sbjct 165059 GTGGAATCCTT-GTCTTGGATCCACCTAACTGCCCAGTCGGCCTT-CTTCTTAATGCAAG 165002 Query 74966 GACAG-TATCGATCGCTTGGAAGAGGCTTG--CCTTCT-CTTCGGGATCCTTGACGAGCT 75021 || | | ||||| || | ||||||| || | || ||| | ||||||| | Sbjct 165001 GAATGGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCTT---GTTCCTTGATGTATG 164945 Query 75022 TGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGT 75081 |||| || | || ||||| ||||| | ||||| ||| | | ||| | ||| Sbjct 164944 TGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGT 164885 Query 75082 AGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAAAATTCATGTCGATATTCTC 75139 |||| | || || |||| || || || || | |||| || | || |||||| Sbjct 164884 AGAAGCAGCGGGCTTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAG--GAGATTCTC 164827 Query 75140 CATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTC 75199 |||| || ||||| || |||||||| ||||| || || || |||| ||||| Sbjct 164826 GTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTC 164767 Query 75200 ATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGAC 75256 ||||||| ||| | |||| ||| || | |||||| | | |||||||||||| | Sbjct 164766 ATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGC 164707 Query 75257 CGTCCAGAAACTCCCAATCGCCTTTTTGTACA 75288 |||||||||| | | ||||| ||||||| Sbjct 164706 CGTCCAGAAAGACGCTTCTGCCTTCTTGTACA 164675 Score = 104 bits (114), Expect = 3e-17 Identities = 336/512 (66%), Gaps = 20/512 (4%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || ||||| || | ||||| | ||| || ||||||||||| | ||| || |||| | Sbjct 175035 TCGTTCGAGAAGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCG 174976 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 ||||| || ||||||||| || || || || ||||| || ||||| || ||||| Sbjct 174975 AAGGAGCCGGAGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAG 174916 Query 74910 GGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGG 74965 | | ||| ||| ||||| | ||||| || || || | | | | ||| | Sbjct 174915 GTGGAATCCTT-GTCTTGGATCCACCTAACTGCCCAGTCGGCCTT-CTTCTTAATGCAAG 174858 Query 74966 GACAG-TATCGATCGCTTGGAAGAGGCTTG--CCTTCT-CTTCGGGATCCTTGACGAGCT 75021 || | | ||||| || | ||||||| || | || ||| | ||||||| | Sbjct 174857 GAATGGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCTT---GTTCCTTGATGTATG 174801 Query 75022 TGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGT 75081 |||| || | || ||||| ||||| | ||||| ||| | | ||| | ||| Sbjct 174800 TGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGT 174741 Query 75082 AGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAAAATTCATGTCGATATTCTC 75139 |||| | || || |||| || || || || | |||| || | || |||||| Sbjct 174740 AGAAGCAGCGGGCTTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAG--GAGATTCTC 174683 Query 75140 CATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTC 75199 |||| || ||||| || |||||||| ||||| || || || |||| ||||| Sbjct 174682 GTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTC 174623 Query 75200 ATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGAC 75256 ||||||| ||| | |||| ||| || | |||||| | | |||||||||||| | Sbjct 174622 ATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGC 174563 Query 75257 CGTCCAGAAACTCCCAATCGCCTTTTTGTACA 75288 |||||||||| | | ||||| ||||||| Sbjct 174562 CGTCCAGAAAGACGCTTCTGCCTTCTTGTACA 174531 >seq71 Length=14946 Score = 100 bits (110), Expect = 3e-16 Identities = 336/512 (66%), Gaps = 21/512 (4%) Strand=Plus/Plus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || ||||| || | ||||| | ||| || ||||||||||| | ||| || |||| | Sbjct 12551 TCGTTCGAGAAGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCG 12610 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 ||||| || ||||||||| || || || || ||||| || ||||| || ||||| Sbjct 12611 AAGGAGCCGGAGAAGAAGATACCCTCAACGGG-GCGAAGGCAACGAGGCGCTGAGCGAAG 12669 Query 74910 GGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGG 74965 | | ||| ||| ||||| | ||||| || || || | | | | ||| | Sbjct 12670 GTGGAATCCTT-GTCTTGGATCCACCTAACTGCCCAGTCGGCCTT-CTTCTTAATGCAAG 12727 Query 74966 GACAG-TATCGATCGCTTGGAAGAGGCTTG--CCTTCT-CTTCGGGATCCTTGACGAGCT 75021 || | | ||||| || | ||||||| || | || ||| | ||||||| | Sbjct 12728 GAATGGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCTT---GTTCCTTGATGTATG 12784 Query 75022 TGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGT 75081 |||| || | || ||||| ||||| | ||||| ||| | | ||| | ||| Sbjct 12785 TGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGT 12844 Query 75082 AGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAAAATTCATGTCGATATTCTC 75139 |||| | || || |||| || || || || | |||| || | || |||||| Sbjct 12845 AGAAGCAGCGGGCTTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAG--GAGATTCTC 12902 Query 75140 CATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTC 75199 |||| || ||||| || |||||||| ||||| || || || |||| ||||| Sbjct 12903 GTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTC 12962 Query 75200 ATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGAC 75256 ||||||| ||| | |||| ||| || | |||||| | | |||||||||||| | Sbjct 12963 ATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGC 13022 Query 75257 CGTCCAGAAACTCCCAATCGCCTTTTTGTACA 75288 |||||||||| | | ||||| ||||||| Sbjct 13023 CGTCCAGAAAGACGCTTCTGCCTTCTTGTACA 13054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215432263400