Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq20 136 3e-27 >seq20 Length=799479 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || |||||| | ||||| ||||| |||||| | ||| Sbjct 288342 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCC 288401 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || |||||||| ||||| || || || || || || Sbjct 288402 GATACCATTGATAACGTCAAGTCGAAGATTCAAGATAAAGAGGGTATCCCTCCGGACCAG 288461 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || |||| || | ||| | || || |||||| Sbjct 288462 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAAC 288521 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||||||| | ||| ||||| | ||| | || ||||| || Sbjct 288522 ATTCAGAAGGAGTCGACCCTGCATCTGGTTCTCCGTCTTCGTGGTGGTAT 288571 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | || ||| | || || || ||||| Sbjct 288114 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 288173 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||||| || ||||| || ||||| || || || || Sbjct 288174 GACACCATCGACAATGTGAAGTCGAAAATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 288233 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || | || ||| | ||| | ||||| |||||| Sbjct 288234 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 288293 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | || ||||| | ||| | || ||||| || Sbjct 288294 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGTGGTGGTAT 288343 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 |||| |||||| | || || || || || || ||||||| | || || | ||||| Sbjct 287908 TGACGGGCAAGACCATCACCCTAGAGGTCGAGTCGTCCGATACCATCGACAACGTCAAGA 287967 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || || |||||||| || || || || || || || || ||| | || | |||||||| Sbjct 287968 GCAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCA 288027 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | ||| | || ||| | ||| | ||||| |||||||| || |||||||||||| | | Sbjct 288028 AGCAACTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCC 288087 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | |||| | ||| | || ||||| || Sbjct 288088 ACCTGGTCCTTCGTCTTCGCGGTGGTAT 288115 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||| || || ||| | ||||| || ||||| || |||| Sbjct 288570 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 288629 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || ||||| || || || || || || || || Sbjct 288630 GATACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGTATCCCTCCGGACCAG 288689 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || | || || | ||| | || ||||||||| Sbjct 288690 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGATTACAAC 288749 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| ||||| | ||| | || | || ||||| || Sbjct 288750 ATCCAGAAGGAGTCGACGCTACATCTTGTTCTCCGCCTCCGTGGTGGTAT 288799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917948772160