Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq15 149 1e-30
seq20 134 3e-26
seq4 125 2e-23
seq37 95.1 3e-14
seq52 89.7 1e-12
>seq15
Length=1123021
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| ||||||||||| | ||| || ||||| || || |||| ||||| || | | ||
Sbjct 653306 ACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 653247
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| ||||||||||| || || || ||||| || ||||| ||
Sbjct 653246 GCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCC 653187
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||| ||||| || | ||||| || |
Sbjct 653186 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAG 653127
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||||||||||| || || | ||| | ||||||
Sbjct 653126 GGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 653085
>seq20
Length=799479
Score = 134 bits (148), Expect = 3e-26
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | ||||| |||||||| || || || || |||| ||||| |||| | ||
Sbjct 288106 CGAAGACGAAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 288047
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || || ||||| || |||||||| || ||||| ||||| || ||||| ||
Sbjct 288046 CGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCC 287987
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||||||||||||||| ||| || |||||||| || || | || || ||||
Sbjct 287986 TCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCGACCTCTAGG 287927
Query 225673 GTGATCGTCTTGCCCGTCA 225691
||||| |||||||||||||
Sbjct 287926 GTGATGGTCTTGCCCGTCA 287908
Score = 125 bits (138), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| | ||| ||||| || || || || | ||||| |||| | ||
Sbjct 288335 ACGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 288276
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| |||||||| || || || || ||||| || ||||| ||
Sbjct 288275 GCGGCCGTCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCC 288216
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| ||||| || ||||||| ||||||||||| || | || || || ||
Sbjct 288215 CTCCTTGTCCTGGATTTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAA 288156
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||||||| || | || || | ||| | |||||
Sbjct 288155 AGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 288114
Score = 116 bits (128), Expect = 9e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| ||||| || || || || || || |||| |||||||| | || || | |||||
Sbjct 288781 AGAACAAGATGTAGCGTCGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGGCCATCC 288722
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||| || || || || ||||| || || ||||| ||||| |||
Sbjct 288721 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCT 288662
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || |||||||| || || | || || || | ||| || |||
Sbjct 288661 TGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTC 288602
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||| || | ||| | ||||||
Sbjct 288601 TTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 288570
Score = 113 bits (124), Expect = 1e-19
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || || || || || || || || || | ||||| || | || ||
Sbjct 288563 ACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGT 288504
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||| ||||| || || || ||||| || || |||||
Sbjct 288503 GCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACC 288444
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|| || ||||| ||||| ||| || || ||||| || || | |||||| || |
Sbjct 288443 CTCTTTATCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAG 288384
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
||| |||||||||||||| | ||| ||
Sbjct 288383 CGTAATCGTCTTGCCCGTAAGAGTCTT 288357
>seq4
Length=1854919
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | ||| | ||||| || |||||||| ||||| |||||
Sbjct 704161 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 704102
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || ||||| || ||||||||||||||||| ||| ||| |||
Sbjct 704101 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 704042
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| || || |||| || || || | ||||| |||||||||||||| || || | |||
Sbjct 704041 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 703983
>seq37
Length=143392
Score = 95.1 bits (104), Expect = 3e-14
Identities = 82/102 (80%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||| ||||| || |||||||| | |||||| || || |||||||| || || || |
Sbjct 29880 TTCAGGGTGACCGAAGAATCAGAAAAGATGTTGGTATAGTATAGGATCACCACCACCAGC 29939
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
| |||||||| ||||||||||||||||||||||||||
Sbjct 29940 AGCTTCAAAAAATGATGTATTAAAATTTCTATCAGTTAAAAC 29981
Score = 95.1 bits (104), Expect = 3e-14
Identities = 82/102 (80%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||| ||||| || |||||||| | |||||| || || |||||||| || || || |
Sbjct 69545 TTCAGGGTGACCGAAGAATCAGAAAAGATGTTGGTATAGTATAGGATCACCACCACCAGC 69604
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
| |||||||| ||||||||||||||||||||||||||
Sbjct 69605 AGCTTCAAAAAATGATGTATTAAAATTTCTATCAGTTAAAAC 69646
Score = 95.1 bits (104), Expect = 3e-14
Identities = 82/102 (80%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||| ||||| || |||||||| | |||||| || || |||||||| || || || |
Sbjct 101673 TTCAGGGTGACCGAAGAATCAGAAAAGATGTTGGTATAGTATAGGATCACCACCACCAGC 101732
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
| |||||||| ||||||||||||||||||||||||||
Sbjct 101733 AGCTTCAAAAAATGATGTATTAAAATTTCTATCAGTTAAAAC 101774
Score = 95.1 bits (104), Expect = 3e-14
Identities = 82/102 (80%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||| ||||| || |||||||| | |||||| || || |||||||| || || || |
Sbjct 133853 TTCAGGGTGACCGAAGAATCAGAAAAGATGTTGGTATAGTATAGGATCACCACCACCAGC 133912
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
| |||||||| ||||||||||||||||||||||||||
Sbjct 133913 AGCTTCAAAAAATGATGTATTAAAATTTCTATCAGTTAAAAC 133954
>seq52
Length=37714
Score = 89.7 bits (98), Expect = 1e-12
Identities = 83/104 (80%), Gaps = 1/104 (1%)
Strand=Plus/Minus
Query 370670 AATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCT 370729
|| ||||| ||||| || |||||||| | |||||| || || |||||||| || || ||
Sbjct 9519 AACTCAGGGTGACCGAAGAATCAGAAAAGATGTTG-TATAGTATAGGATCACCACCACCA 9461
Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
| | |||||||| ||||||||||||||||||||||||||
Sbjct 9460 GCAGCTTCAAAAAATGATGTATTAAAATTTCTATCAGTTAAAAC 9417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192529931817602
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |