Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq28 188 1e-42
seq3 107 3e-18
seq71 100 4e-16
>seq28
Length=369090
Score = 188 bits (208), Expect = 1e-42
Identities = 409/612 (67%), Gaps = 0/612 (0%)
Strand=Plus/Plus
Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984
||||| ||||| || | || || |||||||||||||||| || |||||||| | | |
Sbjct 126975 TCAAACTCATCGCCGTAGACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGAGAGTC 127034
Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044
||| | || | | || ||| || ||||| |||||||| || ||||| ||||| |||
Sbjct 127035 CAGGCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAAT 127094
Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104
|| || |||| | ||| || || || |||||| | | || || ||||| |
Sbjct 127095 AGGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAG 127154
Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164
| ||| | ||||||||| || | || || || | | | || ||||| || ||||| |||
Sbjct 127155 ACATCCGCATGCCATGGCTCAACGTAGATGGCGAAAGCACCGGGTCGCTTGTTACCACCC 127214
Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224
|| || | || || |||||||| || | || | | ||| |||| |||||||| ||
Sbjct 127215 TGGTCAACGTACCTCGCGGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGAG 127274
Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284
||||||| || || | ||| || ||| | || || ||| | ||| || ||
Sbjct 127275 TTTCCATTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATGTTTAATCCG 127334
Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344
|| ||||| || |||| || || | || || || | || || |||||||||||
Sbjct 127335 ATACCTCCAGCAGTCTTTGAGATCATGGCACATGTCTTGAGCGTGTCATAGATACCCTCA 127394
Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404
||||| || ||| |||||| | | || ||| |||| || || || ||
Sbjct 127395 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTGGTGTACCA 127454
Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464
||||| || | ||| || || || || || || |||| ||| | || ||||||||
Sbjct 127455 GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTC 127514
Query 78465 TCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGC 78524
|| | | || || ||| ||||| || ||||| |||||||| | ||| |||
Sbjct 127515 TCGGTTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCATGTGC 127574
Query 78525 TGAGGTCTTTCA 78536
|| ||||| |||
Sbjct 127575 TGTGGTCTCTCA 127586
>seq3
Length=1861714
Score = 107 bits (118), Expect = 3e-18
Identities = 336/517 (65%), Gaps = 10/517 (2%)
Strand=Plus/Minus
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
||||| || || || || |||| ||| || ||||| || |||||||| || || | |||
Sbjct 165179 TCGTTCGAGAAGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCG 165120
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302
|| || || || ||||| || || || ||||| || || || || | || || |
Sbjct 165119 AAGGAGCCGGAGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAG 165060
Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359
||| || |||| | ||||||| |||||| || ||||||||||| | |||||
Sbjct 165059 GTGGAATCCTTGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGA 165000
Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCA--TTGCTATCTTTAACGTAAGTAT 48417
|| || || || ||||| ||||| | | || | ||| || || | ||| || |
Sbjct 164999 ATGGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCTTG--TTCCTTGATGTATGTGT 164942
Query 48418 CTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAA 48477
| || | || || | |||| |||||| || || || || || || ||||| |
Sbjct 164941 CGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGA 164882
Query 48478 AACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTA 48537
| || | ||||||| ||| || ||||| | | || || || | |||||| || |
Sbjct 164881 AGCAGCGGGCTTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGA 164822
Query 48538 CTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGG 48597
| ||||| || || || || || || | || || ||| || || || | |
Sbjct 164821 CAATTCCGTCTGACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCATCGT 164762
Query 48598 AAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCC 48654
| | | | || |||||||| | | || || || | ||| | || || || ||||
Sbjct 164761 CATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCC 164702
Query 48655 AAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
| || || || ||||| || || ||||| | ||| ||
Sbjct 164701 AGAAAGACGCTTCTGCCTTCTTGTACATCTGCCAGAT 164665
Score = 107 bits (118), Expect = 3e-18
Identities = 336/517 (65%), Gaps = 10/517 (2%)
Strand=Plus/Minus
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
||||| || || || || |||| ||| || ||||| || |||||||| || || | |||
Sbjct 175035 TCGTTCGAGAAGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCG 174976
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302
|| || || || ||||| || || || ||||| || || || || | || || |
Sbjct 174975 AAGGAGCCGGAGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAG 174916
Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359
||| || |||| | ||||||| |||||| || ||||||||||| | |||||
Sbjct 174915 GTGGAATCCTTGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGA 174856
Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCA--TTGCTATCTTTAACGTAAGTAT 48417
|| || || || ||||| ||||| | | || | ||| || || | ||| || |
Sbjct 174855 ATGGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCTTG--TTCCTTGATGTATGTGT 174798
Query 48418 CTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAA 48477
| || | || || | |||| |||||| || || || || || || ||||| |
Sbjct 174797 CGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGA 174738
Query 48478 AACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTA 48537
| || | ||||||| ||| || ||||| | | || || || | |||||| || |
Sbjct 174737 AGCAGCGGGCTTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGA 174678
Query 48538 CTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGG 48597
| ||||| || || || || || || | || || ||| || || || | |
Sbjct 174677 CAATTCCGTCTGACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCATCGT 174618
Query 48598 AAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCC 48654
| | | | || |||||||| | | || || || | ||| | || || || ||||
Sbjct 174617 CATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCC 174558
Query 48655 AAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
| || || || ||||| || || ||||| | ||| ||
Sbjct 174557 AGAAAGACGCTTCTGCCTTCTTGTACATCTGCCAGAT 174521
>seq71
Length=14946
Score = 100 bits (110), Expect = 4e-16
Identities = 335/517 (65%), Gaps = 11/517 (2%)
Strand=Plus/Plus
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
||||| || || || || |||| ||| || ||||| || |||||||| || || | |||
Sbjct 12551 TCGTTCGAGAAGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCG 12610
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302
|| || || || ||||| || || || |||| || || || || | || || |
Sbjct 12611 AAGGAGCCGGAGAAGAAGATACCCTCAACGGG-GCGAAGGCAACGAGGCGCTGAGCGAAG 12669
Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359
||| || |||| | ||||||| |||||| || ||||||||||| | |||||
Sbjct 12670 GTGGAATCCTTGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGA 12729
Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCA--TTGCTATCTTTAACGTAAGTAT 48417
|| || || || ||||| ||||| | | || | ||| || || | ||| || |
Sbjct 12730 ATGGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCTTG--TTCCTTGATGTATGTGT 12787
Query 48418 CTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAA 48477
| || | || || | |||| |||||| || || || || || || ||||| |
Sbjct 12788 CGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGA 12847
Query 48478 AACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTA 48537
| || | ||||||| ||| || ||||| | | || || || | |||||| || |
Sbjct 12848 AGCAGCGGGCTTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGA 12907
Query 48538 CTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGG 48597
| ||||| || || || || || || | || || ||| || || || | |
Sbjct 12908 CAATTCCGTCTGACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCATCGT 12967
Query 48598 AAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCC 48654
| | | | || |||||||| | | || || || | ||| | || || || ||||
Sbjct 12968 CATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCC 13027
Query 48655 AAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
| || || || ||||| || || ||||| | ||| ||
Sbjct 13028 AGAAAGACGCTTCTGCCTTCTTGTACATCTGCCAGAT 13064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668079281120
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