Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq20 120 7e-22
seq15 120 7e-22
seq4 87.8 4e-12
>seq20
Length=799479
Score = 120 bits (132), Expect = 7e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| |||||||| || || ||||| || |||||||||||||| | | || |
Sbjct 288788 GAGGCGGAGAACAAGATGTAGCGTCGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCG 288729
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || ||||| || || | ||||||||||| | ||| || ||
Sbjct 288728 GCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTC 288669
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| ||||| || || ||||| | || | | | || || ||| ||||| || ||
Sbjct 288668 CTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGT 288609
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || || ||||||||||| ||||||| |||||
Sbjct 288608 AATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 288570
Score = 104 bits (114), Expect = 5e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | |||||||| ||||| || || |||||||| |||| | || | || ||
Sbjct 288325 AGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 288266
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || ||||| || || | ||||||||||| | || || ||||| ||
Sbjct 288265 TCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 288206
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| ||||| || ||| | || | | |||| || ||| || || | ||| || ||
Sbjct 288205 TGGATTTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTC 288146
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||| ||||||| ||||||
Sbjct 288145 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 288114
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || ||| || ||||||||||| ||| | || |||||||| || |
Sbjct 289004 CAAG-TGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCCA 288946
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || ||||| || | ||||||||||| | ||| || ||||| || ||||
Sbjct 288945 GCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAA 288886
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | | |||| ||| ||| || || |||||||| || || |
Sbjct 288885 TCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTC 288826
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | ||||| ||||| | ||||||
Sbjct 288825 CAGTCAAGGTCTTGACGAAAATCTGCAT 288798
Score = 100 bits (110), Expect = 7e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || ||||| || || ||||| || || |||||||| || | | || | |||||
Sbjct 288554 GAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATC 288495
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || || ||||| || | ||||||||||| | ||| || || || ||
Sbjct 288494 CTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCTTTATC 288435
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|||||| || ||||| | || | | | || || || || ||||| ||||| ||
Sbjct 288434 TTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGT 288375
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||||||| |||||||| || || | ||||||
Sbjct 288374 CTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 288342
>seq15
Length=1123021
Score = 120 bits (132), Expect = 7e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
|||||| ||||| | ||||| || ||||| || ||||||||||| || | | || |
Sbjct 653303 GAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCG 653244
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || || |||||||| || | ||||||||||| | ||||| ||
Sbjct 653243 GCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTC 653184
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || |||||| | || | |||| || ||| || ||||| ||
Sbjct 653183 CTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 653124
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| |||||||| || ||||||||||||| |||||
Sbjct 653123 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 653085
>seq4
Length=1854919
Score = 87.8 bits (96), Expect = 4e-12
Identities = 132/187 (71%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | ||| | ||||| || || || || || |||||
Sbjct 704161 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 704102
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||||| | ||||| ||||| ||||| || || |||||| | ||
Sbjct 704101 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 704042
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| | || || ||| || ||||| || || || |||||||| | ||||| ||||||
Sbjct 704041 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAAG 703982
Query 152097 ACCTGCA 152103
|||||
Sbjct 703981 --CTGCA 703977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153819572983693
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |