Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq20 172 1e-37 seq4 152 1e-31 seq15 150 4e-31 >seq20 Length=799479 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || ||||||| ||| || || ||||||||||| |||| Sbjct 288797 ACCACCACGGAGGCGGAGAACAAGATGTAGCGTCGACTCCTTCTGGATGTTGTAATCAGA 288738 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || || |||| || || ||||| || Sbjct 288737 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGG 288678 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||| ||||||||||| | || ||| ||||||| || ||||| | ||||| Sbjct 288677 GATACCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGAC 288618 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || || ||||| || || | |||||| ||||| || ||||| Sbjct 288617 TTCCAGCGTAATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 288570 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || |||| || | |||||| || || |||||||||||||| Sbjct 289024 CCACCACGAAGGCGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 288965 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| | |||||||| || || || || |||||||||| || || ||||| || Sbjct 288964 AGCGTCCTCCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGG 288905 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| || || ||||| | || ||| | || || |||||||||| || || Sbjct 288904 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACC 288845 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| || ||||| || ||||| ||||| ||||| |||||||| Sbjct 288844 TCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 288798 Score = 159 bits (176), Expect = 7e-34 Identities = 161/207 (78%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || ||||| ||||| || | || || || |||||||||||||| | Sbjct 288113 ACCACCGCGAAGACGAAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 288054 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| ||||| || ||||| ||||||| |||||| ||||| || Sbjct 288053 GAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGG 287994 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| |||||||||||||||||| ||||| || ||| | ||||| || || || | |||| Sbjct 287993 AATTCCCTCCTTGTCTTGGATC-TTGCTCTTGACGTTGTCGATGGTATCGGACGACTCGA 287935 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077 | || || ||||| ||||| ||||||| Sbjct 287934 CCTCTAGGGTGATGGTCTTGCCCGTCA 287908 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||||||| | || || || || ||||||||||| | Sbjct 288569 ACCACCACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGA 288510 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || |||||||||| || || ||||| || Sbjct 288509 CAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGG 288450 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||| || ||||| ||||| | || ||| |||| || || || || | ||| || Sbjct 288449 GATACCCTCTTTATCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCAC 288390 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||| ||||| | |||||| || || |||||||| Sbjct 288389 CTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 288342 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||| || | || || || || ||||||||||| | Sbjct 288341 ACCACCACGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGA 288282 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || || || || |||| || || ||||| || Sbjct 288281 GAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGG 288222 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| ||||| || | || || | ||||| ||||| || | || || Sbjct 288221 AATGCCCTCCTTGTCCTGGATTTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAAC 288162 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| ||||| || || | ||||| ||||| |||||||| Sbjct 288161 CTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 288114 >seq4 Length=1854919 Score = 152 bits (168), Expect = 1e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||| ||||| |||||||| || || || || ||||||||| Sbjct 704161 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 704102 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || ||||| ||||| |||||||||||||||||||| | || || | ||| Sbjct 704101 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 704042 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||||| || || | ||||| || || ||||| ||||| |||||||| ||||| ||||| Sbjct 704041 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 703983 >seq15 Length=1123021 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || | || |||| || | ||| || || |||||||||||||| | Sbjct 653312 ACCTCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 653253 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || || || ||||||| || || ||||| || Sbjct 653252 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGG 653193 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || || | ||||||||||| || | || || Sbjct 653192 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCAC 653133 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||||| ||||| ||||| || ||||| Sbjct 653132 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 653085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738086858282