Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq15 147 5e-30
seq20 143 6e-29
seq4 125 2e-23
>seq15
Length=1123021
Score = 147 bits (162), Expect = 5e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || || || || || || |||||||| |||||||| || |||
Sbjct 653088 CAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGAC 653147
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| ||||| |||||||| || ||||| || |||||||||||
Sbjct 653148 ACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 653207
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || |||||||| || || | || ||| | || || ||| ||
Sbjct 653208 CGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATC 653267
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || || || | || ||||||||
Sbjct 653268 CAGAAGGAGTCCACCCTTCACTTGGTCCTGAGACTC 653303
>seq20
Length=799479
Score = 143 bits (158), Expect = 6e-29
Identities = 156/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || |||||||| ||||| || || || || || || || || ||
Sbjct 288573 CAAATCTTCGTCAAGACTCTCACTGGAAAGACAATTACGCTGGAAGTCGAGTCGTCGGAT 288632
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| || || || || || |||||||||||||||||
Sbjct 288633 ACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGTATCCCTCCGGACCAGCAG 288692
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || |||||||| ||||| | || || | ||||| ||| ||
Sbjct 288693 CGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGATTACAACATC 288752
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || || |||||||||
Sbjct 288753 CAGAAGGAGTCGACGCTACATCTTGTT 288779
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || ||||| || || || ||||| || || ||||||||| || ||
Sbjct 288345 CAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCCGAT 288404
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| |||||||| || ||||| || |||||||||||||||||
Sbjct 288405 ACCATTGATAACGTCAAGTCGAAGATTCAAGATAAAGAGGGTATCCCTCCGGACCAGCAG 288464
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| || ||||| | || || | || || ||| |
Sbjct 288465 CGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAACATT 288524
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || |||||||| |||
Sbjct 288525 CAGAAGGAGTCGACCCTGCATCTGGTT 288551
Score = 127 bits (140), Expect = 5e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || | || ||||| || || || |||||||| || || |||
Sbjct 288801 CAGATTTTCGTCAAGACCTTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCTTCGGAC 288860
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||||||||| || || || ||||| |||||||||||
Sbjct 288861 ACCATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAGCAG 288920
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| || ||||| ||||| || ||| || ||| ||
Sbjct 288921 CGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGGAGGACGCTGAGCGACTACAACATC 288980
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 288981 CAGAAGGA 288988
Score = 122 bits (134), Expect = 2e-22
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || |||||||| ||||| || || || |||||||| ||||||||
Sbjct 287910 ACGGGCAAGACCATCACCCTAGAGGTCGAGTCGTCCGATACCATCGACAACGTCAAGAGC 287969
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||| || ||||| || ||||| || |||||||||||||| || ||||||||||| ||
Sbjct 287970 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 288029
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
|| ||||| || || | || || |||| || ||| |||| || || || || || ||
Sbjct 288030 CAACTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 288089
Query 178125 CTTGT 178129
|| ||
Sbjct 288090 CTGGT 288094
Score = 105 bits (116), Expect = 2e-17
Identities = 147/205 (72%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || ||||| | ||||| || || |||
Sbjct 288117 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCCGAC 288176
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || || || |||||||| || || || ||||||||||||||
Sbjct 288177 ACCATCGACAATGTGAAGTCGAAAATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 288236
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || ||||| || || || | || || |||| || ||| |
Sbjct 288237 CGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAACATT 288296
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 288297 CAGAAGGAGTCGACTCTTCA-CTTG 288320
>seq4
Length=1854919
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || | || || || || |||||||| ||||| || ||| || || |||
Sbjct 703983 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 704042
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| || ||||| || ||||| || ||||||||||| || ||
Sbjct 704043 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTG 704102
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||| || || || |||||||| |||||| | |||||| |||| || ||| |||| ||
Sbjct 704103 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAA 704161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203729919907102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |