Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq15 147 5e-30 seq20 143 6e-29 seq4 125 2e-23 >seq15 Length=1123021 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 653088 CAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCCGAC 653147 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || ||||| || ||||||||||| Sbjct 653148 ACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 653207 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| || || | || ||| | || || ||| || Sbjct 653208 CGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATC 653267 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || |||||||| Sbjct 653268 CAGAAGGAGTCCACCCTTCACTTGGTCCTGAGACTC 653303 >seq20 Length=799479 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || |||||||| ||||| || || || || || || || || || Sbjct 288573 CAAATCTTCGTCAAGACTCTCACTGGAAAGACAATTACGCTGGAAGTCGAGTCGTCGGAT 288632 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| || || || || || ||||||||||||||||| Sbjct 288633 ACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGTATCCCTCCGGACCAGCAG 288692 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || |||||||| ||||| | || || | ||||| ||| || Sbjct 288693 CGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGATTACAACATC 288752 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || ||||||||| Sbjct 288753 CAGAAGGAGTCGACGCTACATCTTGTT 288779 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || ||||| || || || ||||| || || ||||||||| || || Sbjct 288345 CAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCCGAT 288404 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||| || ||||| || ||||||||||||||||| Sbjct 288405 ACCATTGATAACGTCAAGTCGAAGATTCAAGATAAAGAGGGTATCCCTCCGGACCAGCAG 288464 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || ||||| | || || | || || ||| | Sbjct 288465 CGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAACATT 288524 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || |||||||| ||| Sbjct 288525 CAGAAGGAGTCGACCCTGCATCTGGTT 288551 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || ||||| || || || |||||||| || || ||| Sbjct 288801 CAGATTTTCGTCAAGACCTTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCTTCGGAC 288860 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||||||||| || || || ||||| ||||||||||| Sbjct 288861 ACCATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAGCAG 288920 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || ||||| ||||| || ||| || ||| || Sbjct 288921 CGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGGAGGACGCTGAGCGACTACAACATC 288980 Query 178104 CAAAAAGA 178111 || || || Sbjct 288981 CAGAAGGA 288988 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || |||||||| ||||| || || || |||||||| |||||||| Sbjct 287910 ACGGGCAAGACCATCACCCTAGAGGTCGAGTCGTCCGATACCATCGACAACGTCAAGAGC 287969 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| || ||||| || ||||| || |||||||||||||| || ||||||||||| || Sbjct 287970 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 288029 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || ||||| || || | || || |||| || ||| |||| || || || || || || Sbjct 288030 CAACTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 288089 Query 178125 CTTGT 178129 || || Sbjct 288090 CTGGT 288094 Score = 105 bits (116), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| | ||||| || || ||| Sbjct 288117 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCCGAC 288176 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || || || |||||||| || || || |||||||||||||| Sbjct 288177 ACCATCGACAATGTGAAGTCGAAAATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 288236 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || ||||| || || || | || || |||| || ||| | Sbjct 288237 CGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAACATT 288296 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 288297 CAGAAGGAGTCGACTCTTCA-CTTG 288320 >seq4 Length=1854919 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || | || || || || |||||||| ||||| || ||| || || ||| Sbjct 703983 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 704042 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| || ||||| || ||||| || ||||||||||| || || Sbjct 704043 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTG 704102 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || || |||||||| |||||| | |||||| |||| || ||| |||| || Sbjct 704103 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAA 704161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729919907102