Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq529 95.1 3e-14 >seq529 Length=148573 Score = 95.1 bits (104), Expect = 3e-14 Identities = 305/471 (65%), Gaps = 12/471 (3%) Strand=Plus/Minus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 || ||| |||||||||| |||| | ||||| |||||| | || || || ||| Sbjct 107045 TTCGCCCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATTTTCTTCTCTGGCTCCTTC 106986 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 |||| || ||||| ||| || | ||| ||||||| | ||||||||| Sbjct 106985 GCATCCATTTTCTGGCTTAAGAAGCGTGGCCTCATGGCTGGCCTTACCTTCTCTAACGAG 106926 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTC 230352 |||| ||||||||||||||||| | |||| | || | | || | || Sbjct 106925 CTCATTTCCCGCGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCTCACCTT 106866 Query 230353 CAGAAC-----AAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAA 230407 | || |||| | || | | ||| || | ||||||| || || ||| | Sbjct 106865 AAACACCGCCCAAGCAAGCA-----GGCCGTCCAAGACGTCATTACCGAGGCTGTTAGCA 106811 Query 230408 ACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAAC 230467 || | |||||| | || || |||| ||| || | ||||||||||| ||| Sbjct 106810 TTGAGCAAGAGTTCCTGACCGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCC-AAC 106752 Query 230468 TT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAG 230526 || ||| || ||||| || ||||| |||||| | | || || | || || ||||| Sbjct 106751 TTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTTCTTTCTCTCGGCAACGAG 106692 Query 230527 AAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAG 230586 || | ||||| || ||||| || | || |||||| ||| || || || ||| Sbjct 106691 AAGTTCTACAAATCGGCCAACCCATTCGACTTCATGGAGAACATCTCCCTGGCCGGTAAG 106632 Query 230587 ACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 || ||||||||||| ||||| ||| | ||||| || | | ||||||| ||| Sbjct 106631 ACTAACTTCTTCGAGAAGCGCGTCGGCGACTACCAAAAGACTGGTGTCATG 106581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057815881531370