Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq427 163 4e-35 seq529 140 4e-28 >seq427 Length=360985 Score = 163 bits (180), Expect = 4e-35 Identities = 743/1159 (64%), Gaps = 32/1159 (3%) Strand=Plus/Minus Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947 || ||||| ||||||| ||||| ||||| ||||||| || | | | || | | || Sbjct 266452 CAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAAT 266393 Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007 ||| |||||||| || | || || || | || | || || ||||| ||| Sbjct 266392 CTCTGTGCAAAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTT 266333 Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067 || |||||||| || || ||||| || | || || ||| | |||| || | ||| | Sbjct 266332 GCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGA 266273 Query 63068 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTT---TCTCTTTCGTA-- 63121 | ||| | | || | ||||| || | ||| | | || || || ||||| Sbjct 266272 GTACCAAA-GCTTCTGGGCCTTGATGGTC---TTGCGACCCTTTCCATCCCTCTCGTAGC 266217 Query 63122 TAGTGTATACAATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCAT 63180 | ||| || || || ||||| || || |||| | |||| ||||| || || | Sbjct 266216 TCTCGTA---AAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGT 266160 Query 63181 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63240 || ||||| | | ||| || |||| | || || || ||||| |||||||| || | Sbjct 266159 TGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGA 266100 Query 63241 TCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 63299 |||| ||||| || || || || | || | |||||| || || |||||| | Sbjct 266099 TCCAGAGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTC 266041 Query 63300 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63359 | || |||||| | | | ||| | ||||| || || | ||| ||||| | | | ||| Sbjct 266040 AAGTCTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCA 265981 Query 63360 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63419 || || ||||| || || || || | |||||| || ||||| || | || | | ||| Sbjct 265980 GGGCGCTTGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATG 265921 Query 63420 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATA 63479 |||| ||||| || || | || |||||||| | ||| || ||| ||||||| ||| Sbjct 265920 GGAACGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATA 265861 Query 63480 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63539 | || | || || || || || | || ||||| | || || || | Sbjct 265860 CGATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGT 265801 Query 63540 GTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63599 ||||||||||||||||| || || || || |||||| | | || ||| |||| Sbjct 265800 GTGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACA-- 265743 Query 63600 TGGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 63655 | ||| | || || || ||||| || | || || |||||||| || || |||| Sbjct 265742 -GCTGA-GCCTGTGGTGTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTT 265685 Query 63656 TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 63715 ||| | || ||||| ||||| || | || |||||| ||||| || || Sbjct 265684 GGAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCAC 265625 Query 63716 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63775 || |||||||| | ||||||||| || || ||| | | ||| | | | | || Sbjct 265624 CGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTT-TCCATCAAGACGGAGAA 265566 Query 63776 G-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 63832 | || ||| | |||| || || || ||||| || | ||| ||||| || || ||||| Sbjct 265565 GATACGATCTCTCCAGTGTCTTGAAGCCAAAGTATTGGTAGTTGAAA--TCACGGTCGTA 265508 Query 63833 AATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGA 63892 || | | |||||||| | || | || |||| | || || | ||| Sbjct 265507 AAGGACGGCAGAGTTGAGCTCGTCTGCGTGCTTCATAACGGTGTCATATGTCTTCTTTGC 265448 Query 63893 AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCAC 63952 ||| || || || | ||| || || || || || |||| | | | || | || || Sbjct 265447 AATCATGGGCGACGGCTTCGAGTTCTTGGGGTTTACGTAGTGGTACAGGTCGTAGATGAC 265388 Query 63953 TTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTA 64011 | || | ||| | || || || | |||||| || || || ||||| || | || || | Sbjct 265387 -TGACGAGAATTGCTTCTTCGTCTGCTTGTGAAGGTTCGACACGGCAATACGTGCAGCCA 265329 Query 64012 GAATGGCATAATCCGGATG 64030 | |||||||| || || || Sbjct 265328 GGATGGCATAGTCTGGGTG 265310 >seq529 Length=148573 Score = 140 bits (154), Expect = 4e-28 Identities = 180/248 (73%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| || ||| ||||||||||| | ||| || ||||| || || || || Sbjct 106885 CAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGG 106944 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || | ||| ||||||||||| |||||||| || ||||| ||||| || ||||| ||||| Sbjct 106945 CCAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAA 107004 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33480 || || || || ||||| ||||||| || | || | | | | |||| || Sbjct 107005 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAGGTAGAATCCTTGTCTTGG 107064 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 |||||| | |||||||||||||||||| || | ||||| || || || |||||||| Sbjct 107065 ATCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 107124 Query 33541 AAGAGATA 33548 ||||| || Sbjct 107125 AAGAGGTA 107132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622942535682840