Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq529 116 4e-21 >seq529 Length=148573 Score = 116 bits (128), Expect = 4e-21 Identities = 368/567 (65%), Gaps = 9/567 (2%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || ||||| || || | ||| ||||| || || || | ||| || ||| || | Sbjct 106884 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAG 106943 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || | | || || || ||||| ||||| || || || || || ||||| || || Sbjct 106944 GCCAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAA 107003 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-C 93269 ||||| || ||||| || || || || | ||| | ||| || | | ||| || | Sbjct 107004 AATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAGGTAG---AATCCTTGTC 107060 Query 93270 T--GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | |||||| | | |||||||||||| || ||||| || ||||| | || ||||| || Sbjct 107061 TTGGATCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGC 107120 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || ||||| || | | || |||||||| || || | || || || Sbjct 107121 ATTGAAGAGGTATGTGCGTTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAGGGAGTA 107180 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | || | || | ||||| || ||||||||| |||||||| || | ||||| | Sbjct 107181 TGTCTCGGCGTGAATGTTCTCGATCATAATTTGGAAACCGTAGAAGCAGCGGGCTTCTGG 107240 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 ||| || || || || | ||| | ||| || || ||||| || || || || || Sbjct 107241 GATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCCGACGC 107300 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATC 93564 || || ||||| | | || || || | |||||| || || | | || | Sbjct 107301 GGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGGCGGTTGTT 107360 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| ||| || || || || ||||| | || || | ||||| || || || || || Sbjct 107361 CCAGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGAGGCCTCCGC 107420 Query 93625 TTTTTTGTACATATCCCATATGTCTTG 93651 || |||||||| | ||| || | ||| Sbjct 107421 CTTCTTGTACATCTGCCAGATCTATTG 107447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556856630504760