Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq427 322 9e-83 seq529 313 5e-80 >seq427 Length=360985 Score = 322 bits (356), Expect = 9e-83 Identities = 1111/1716 (65%), Gaps = 59/1716 (3%) Strand=Plus/Minus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| |||| |||| || || ||| ||| |||| | ||||||||||||||||||||| Sbjct 267357 ACGGTGAATTGGATAGGGGCCGAGGCAGCCATGGTACGGAGGTAGTACATGCCGGTCTTG 267298 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || ||| |||| | | |||||||| || | ||| ||| || ||||| Sbjct 267297 AGGCCAAGCTTCCAGCCAGCAAAGTGCATGGATGTGATCTTGCCCAT--TG----TTGGG 267244 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 || | | | || |||||| |||||| ||| || | ||||| | || || Sbjct 267243 TCCTTCATGTG------GATGTTGAGAGACTGGGACTGATCAATGAAGGCTCCACGGTCA 267190 Query 243917 GCGGCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 || ||||| || || ||| | ||| || ||||| | | ||||| |||| || ||| Sbjct 267189 GCAGCCATCTGGACGATGGTGCG-CTGGGAGATCTCCCAGACGGTCTTATAGAGGGCCTT 267131 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || || | |||| |||||| || | ||||| || | |||||| || | Sbjct 267130 GATGTCGGCAGGGATGTTGGGGATGTTTTGGATGGAGCCTCCGTCGGCGATGATGCGGTT 267071 Query 244036 GCGCATGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCT---CGACCAGGTGCCTGT 244091 |||||| || |||||| |||| | || | || | | | |||||| | | Sbjct 267070 CTTCATGTTGTCAGACCACAGACCCATATCGACCAAGTCCTTGAGCAACCAGGGG----T 267015 Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151 | || || || ||||| || | ||| || || ||| ||| | ||| | || |||| Sbjct 267014 TAACAACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAAATGTTCGAGGTGTATGGCT 266955 Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211 ||| || ||| || ||| || ||||| | ||| ||||| |||||||| | || | Sbjct 266954 CGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAGGCAGTGGGCATGGGTGCAACGA 266895 Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271 ||||| ||| | || |||||| || ||| || |||| || ||||||||||| Sbjct 266894 GCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGTCCCAGTCCCACA 266835 Query 244272 TGCCCG-AGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTG 244330 | | | || ||| | |||||||||||| | || ||| |||||| Sbjct 266834 GGTCGGTAGGGGTA----------ACGCCCCACATGTCGTATTGGAGCTCGCCCTTGGAT 266785 Query 244331 ACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCT-TACAGCTCTC 244389 || || |||||||| ||| ||| | || | | ||||||||||| ||| | Sbjct 266784 ACTGGAGATCCCTCGTACGTCTCGTACGTGCCATGGATCTGGGCCAGCTCTACGGAAGCA 266725 Query 244390 GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCC 244449 ||| | | | ||| ||| |||||||| |||||| ||| | | ||||| | Sbjct 266724 GTCAAAG-CACCGTGGTAAATGGTCTCAAAGATCTGGGAGTTGAGGAACTTGGCCTCGGG 266666 Query 244450 GCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCC 244509 | |||||| | || | || ||| | || || || ||||| || || | | Sbjct 266665 AGAATCGAAGGGAAGGCGGAGAGCCAAGAATGCATCAGCAAGGCCCTGGACACCAACAGC 266606 Query 244510 GATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569 | ||| ||||| || |||| |||| |||| || |||||||| ||||| | || Sbjct 266605 AACGGGCCTGTGGCGGAAGTTGCTGCGCCTGGCCTCTTCGACGGGGTAGTAGTTGACATC 266546 Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGAAAGT 244628 || | |||||| | ||| | | | || | | ||| ||| ||| ||| |||| Sbjct 266545 AATGATCTTGTTCAAGTT-CTTGACAACAACCTGTGTGACCTCGTGAAGCTTCTGGAAGT 266487 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTG--AGGGCGACGCT 244686 |||| | | | ||| || ||| || | ||||| ||||| | | Sbjct 266486 CGTATGTGCCG------TTGGCCAT----ATCAACATA----CGTTGGCAGGGCAAGGGA 266441 Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 |||| ||| || ||||| ||||| || | | ||||| ||||||||| ||||| || Sbjct 266440 TGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAATCTCTGTGCAAAG 266381 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 ||| || ||||| || |||| || || ||| |||| |||||| || ||||| Sbjct 266380 GTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTT 266321 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 ||| |||||||| || || ||||| || || |||| | | || ||| || | Sbjct 266320 GTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGAGTACCAAAGCTT 266261 Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926 | ||||||| ||| ||||| |||| || || |||||||| ||| || ||||| Sbjct 266260 CTGGGCCTTGATGGTCTTGCGACCCTTTCCATCCCTCTCGTAGCTCTCGTAAAGCGCCTC 266201 Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCA 244986 ||||| ||| | || || | | || |||||| ||||||||||| |||| Sbjct 266200 AAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGTTGGGGCACATGAGGGTCCA 266141 Query 244987 CTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAG 245046 || ||| | || || | || ||||||||| || ||||||||||| || | ||| | Sbjct 266140 GTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAA 266081 Query 245047 GTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGAC 245106 ||| | || | || ||| ||| |||||| |||| || | || |||||||| Sbjct 266080 GTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCTAGGAACTCAAAGAC 266021 Query 245107 GTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTG 245166 || ||||||| ||||| | ||||| |||| || || || ||||||||||| || || Sbjct 266020 ATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCTTG 265961 Query 245167 GTCCAC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGT 245225 ||| || ||| | | | |||||||| ||| || | || || || || || |||| Sbjct 265960 GTCAACGTATCTTGCAGTG-TTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGAGT 265902 Query 245226 GGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTG--AGGTTGCTGATGGACATGCC 245283 |||||||| || |||||| || || || | | | | | || |||| || || Sbjct 265901 TTCCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATACGATG--GATGTTCAATCC 265844 Query 245284 TAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTC 245343 | || |||||| ||| ||||| | ||| ||| |||||| ||||| || ||||| Sbjct 265843 GATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTC 265784 Query 245344 CATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCA 245403 || |||||| |||||||| || || |||||||| |||||||| | || || | | Sbjct 265783 AATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGTGTACC 265724 Query 245404 CGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 | ||||| || || ||| ||||| || ||||| Sbjct 265723 GGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTA 265688 >seq529 Length=148573 Score = 313 bits (346), Expect = 5e-80 Identities = 602/863 (70%), Gaps = 36/863 (4%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||||||||||||| || ||| |||||| || ||||||||||| || Sbjct 107441 ATCTGGCAGATGTACAAGAAGGCGGAGGCCTCTTTCTGGACAGCAGAGGAGATTGATCTC 107382 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAA 42415 |||||||| || |||| | || | || | |||| || | ||| || Sbjct 107381 TCCAAGGACCTCCACGACTGGAACA-ACCGCCTCAACGACGATGAGCGCTACTTCATCTC 107323 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | || || ||||||||||| || ||||| || ||||| |||||||| || | || Sbjct 107322 CCACGTTCTCGCTTTCTTCGCCGCGTCGGACGGAATTGTCAACGAGAACCT--CCTCGAG 107265 Query 42476 G--TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCC 42533 |||| | ||||| || | || || |||||||||||||| ||||| || Sbjct 107264 CGCTTCAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATTATG 107205 Query 42534 ATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGAT 42590 || |||||| | ||| | ||| ||| || || |||| |||| |||||| ||| Sbjct 107204 ATCGAGAACATTCACGCCGAGACATACTCC---CTCCTCATTGACACATACATCAAGGAG 107148 Query 42591 CCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAG 42650 | | | || | || ||||| ||||| ||||| || || ||||||||||||||| Sbjct 107147 CAAGCTCAACGCACATACCTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAG 107088 Query 42651 GCGGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGT 42709 || || ||||| ||| |||||| | || | | | | || |||| | || | || || Sbjct 107087 GCCGATTGGGCTGTCAGGTGGATCCA-AGACAAGGATTCTACCTTCGCCCAGCGTCTCGT 107029 Query 42710 AGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT 42769 ||||| | ||||| ||||| || |||||||| ||| ||||||| ||||| |||||||| Sbjct 107028 TGCCTTCGCTGCCGTTGAGGGTATTTTCTTCTCTGGCTCCTTCGCATCCATTTTCTGGCT 106969 Query 42770 CAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACG 42828 ||| || || || ||| | || || |||||||| ||||| ||||| | | |||| Sbjct 106968 TAAGAAGCGTGGCCTC-ATGGCTGGCCTTACCTTCTCTAACGAGCTCATTTCCCGCGACG 106910 Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCT 42888 |||| || || | ||||| ||||||||||| ||||| ||||| | ||| |||| Sbjct 106909 AGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTC---TCACCTTAAACAC-CGCCCA 106854 Query 42889 CG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTC 42947 | ||| || |||| | | |||| || ||||| || || ||| | |||||||| Sbjct 106853 AGCAAGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTTAGCATTGAGCAAGAGTTCCTG 106794 Query 42948 ACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATG-TGCAAGTACA 43005 || || | || ||| ||| | ||| ||||||||||| | || | ||| |||| |||| Sbjct 106793 ACCGAGGCACTTCCCTGTG-CGCTGCTCGGCATGAACGCCAACTTGATGAAGCAA-TACA 106736 Query 43006 TCCAGTACGTCGCCGAC---CATCTCCTGTGCCAGATGGGTCTC-AGCCGCCTCTACAAC 43061 | ||| |||||||||| | || || | | | || | || | ||||||| Sbjct 106735 TTGAGTTCGTCGCCGACAGGCTGCTTCTTTCTC---TCGGCAACGAGAAG-TTCTACAAA 106680 Query 43062 ACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTC 43121 || | ||| |||||||| |||||||||||||| ||| || ||||| ||||| ||| Sbjct 106679 TCGGCCAACCCATTCGACTTCATGGAGAACATCTCCCTGGCCGGTAAGACTAACTTCTTC 106620 Query 43122 GAGAAGCGCGTCGCCGACTACCA 43144 ||||||||||||| ||||||||| Sbjct 106619 GAGAAGCGCGTCGGCGACTACCA 106597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944332129260240