Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq427 233 2e-56 seq529 149 8e-31 >seq427 Length=360985 Score = 233 bits (258), Expect = 2e-56 Identities = 1050/1648 (64%), Gaps = 37/1648 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || |||||||| || |||||||| || | ||||| || | Sbjct 267321 CGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAGCCAGCAAAGTGCATGGATGTG 267262 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | |||||| | |||| || ||| | | ||||| ||||| |||||| Sbjct 267261 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGAGACTGGGACTGATCAATGAAG 267202 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 115734 ||| || || || ||||| | | | | | | || | || ||||| || || Sbjct 267201 GCTCCACGGTCAGCAGCCATCTGGACGA--TGGTGCG-CTGGGAGATCTCCCAGACGGTC 267145 Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794 | |||||| ||| || || | ||||| | ||| |||||||| ||||| || | Sbjct 267144 TTATAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTTTGGATGGAGCCTCCGTCG 267085 Query 115795 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCT----C 115850 || ||| | | |||||| | | ||||| ||||| || | | |||| | Sbjct 267084 GCGATGATGCGGTTCTTCATGTTGTCAGACCACAGACCCATATCGACCAAGTCCTTGAGC 267025 Query 115851 CACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910 || ||| | || ||||| ||||| || || ||| || | | || ||||| Sbjct 267024 AACCAGGGG----TTAACAACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAAATGTT 266969 Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970 | ||||||||||| |||||||| ||| || | || |||| |||||||| ||||| Sbjct 266968 CGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAGGCAGTGGG 266909 Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGC 116030 ||||||||| | ||| || |||||||| ||| | | | || | ||||||| | Sbjct 266908 CATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGA 266849 Query 116031 GTCCCAGTCGTAGTTGA-GCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTT 116089 ||||||||| | | | | | | | | ||||||| || | ||||| || | Sbjct 266848 GTCCCAGTCCCACAGGTCGGTAGGGGTAACGC-CCCACATGTCGTATTGGAGCTCGCCCT 266790 Query 116090 GGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGC 116149 ||| |||| |||||||| | ||||| || | ||| | | || |||| || | Sbjct 266789 TGGATACTGGAGATCCCTCGTACGTCTCGTACGTGCCATGGATCTGGGCCAGCTCTACGG 266730 Query 116150 TCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCT 116209 || | || |||| || || |||||||| || | | || | |||||||| Sbjct 266729 AAGCAGTCAAAGCACCGTGGTAAATGGTCTCAAAGATCTGGGAGTTGAGGAACTTGGCCT 266670 Query 116210 CGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 116269 || ||||| || | || ||| | ||| |||| || || || |||||||| | Sbjct 266669 CGGGAGAATCGAAGGGAAGGCGGAGAGCCAAGAATGCATCAGCAAGGCCCTGGACACCAA 266610 Query 116270 GGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAAT 116326 ||| || | || | | || | || || ||| ||||| || | | Sbjct 266609 CAGCAACGGGCCTGTGGCGGAAGTTGC---TGCGCCTGGCCTCTTCGACGGGGTAGTAGT 266553 Query 116327 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 116386 | ||| || | | | || | || ||| ||||||| ||||| || |||||||| | Sbjct 266552 TGACATCAATGATCTTGTTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGAAGCTTCT 266493 Query 116387 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 116446 | | || | ||| | | || |||||| | || ||||| | || |||| | Sbjct 266492 GGAAGTCGTATGTGCCGTTGGCCATATCAACATACGTTGGCAGGGCAAGGGATGCCAAGT 266433 Query 116447 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAAC 116506 ||||||| | |||||| | ||| |||||| | ||| || || || | || || | Sbjct 266432 TACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAATCTCTGTGCAAAGGTTGGAGC 266373 Query 116507 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCA 116566 | |||||| || | |||||| || || ||| ||| || ||||||||||| |||| Sbjct 266372 TGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAGCA 266313 Query 116567 TATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCT 116625 | | || | || ||||| ||||| | || |||||| | | ||| | | || | | || Sbjct 266312 TGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGAGTACCAAAGCTTCTGGGCCT 266253 Query 116626 GGCACAGTGGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAAC 116682 | ||| ||| | | || ||| |||||| | ||| || ||||||||| Sbjct 266252 TGA----TGGTCTTGCGACCCTTTCCATCCCTCTCGTAGCTCTCGTAAAGCGCCTCAAAC 266197 Query 116683 TCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGA 116742 || || || | | || | | ||| || || | || || | ||| | ||| | | Sbjct 266196 TCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCA 266137 Query 116743 CCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCC 116802 || || |||||| |||||||||||||| || ||||||||||| || |||| | || Sbjct 266136 CCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAGTCA 266077 Query 116803 CGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 116862 || || |||| || | || || || | ||| || | || || | || |||| Sbjct 266076 CGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCTAGGAACTCAAAGACATCC 266017 Query 116863 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTT 116919 |||||||| || || | ||| | |||| | || ||| ||| | |||| Sbjct 266016 GCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCTTGGTCA 265957 Query 116920 ACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCA 116979 || || || || || ||| || ||||| ||||| |||| |||||||| || | || Sbjct 265956 ACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGAGTTTCCG 265897 Query 116980 TTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATAC 117037 || || || ||| || | || | |||| | || | ||||||| || || |||| Sbjct 265896 TTGGTACCAGCGATGTATG-CACCAG-TGGCACGGATACGATGGATGTTCAATCCGATAC 265839 Query 117038 CCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCG 117097 | || || ||||||||| || || | |||| || | ||||| || || || Sbjct 265838 CTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCAATAC 265779 Query 117098 AGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGT 117157 ||| |||| | ||| | ||||||| ||||| || | | ||||||||| || | Sbjct 265778 TGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGTGTACCGGCAT 265719 Query 117158 TGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 ||||||| ||||| | ||||| |||| Sbjct 265718 TGAAGAGTGTTGGGGAAGCGTGTGTGAA 265691 >seq529 Length=148573 Score = 149 bits (164), Expect = 8e-31 Identities = 344/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||||||||||||||| ||||| ||||| || || |||||| || || | |||||| || Sbjct 106899 GTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGGCCAGCCATGAGGCC 106958 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | ||||||||| | || |||||||||||||| || ||||| || Sbjct 106959 ACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAAATACCCTCAACGGC 107018 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 127709 ||||| |||| ||||||| ||| |||| | | |||| | | |||| | | | Sbjct 107019 AGCGAAGGCAACGAGACGCTGGGCGAAGG-TAGAATCCTTGTCTTGGATCCACCTGACAG 107077 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 127769 |||| | ||||| |||| ||| || || | ||||| ||| || | ||||| | | Sbjct 107078 CCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC 107137 Query 127770 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCA 127829 || | | | || |||||||| | || ||||| || ||||| ||| |||| | Sbjct 107138 GTTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAGGGAGTATGTCTCGGCGTGAATGT 107197 Query 127830 TTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 127888 | || || || || || ||||||| |||| ||||| || || ||||| | Sbjct 107198 TCTCGATCATAATTTGGAAAC-CGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCT 107255 Query 127889 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 127947 || || | | || ||||| |||||||| || ||| | || || || || || Sbjct 107256 GCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCCGACGCGGCGAAGAAAGCGAG 107315 Query 127948 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATC 128004 | | ||||| | | |||| ||||| | || | |||||||||| ||| || Sbjct 107316 AACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGGCGGTTGTTCCAGTCGTGGAGGTC 107375 Query 128005 CTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||| |||||||| | |||||| || ||||| Sbjct 107376 CTTGGAGAGATCAATCTCCTCTGCTGTCCA 107405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613502606364840