Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq534 86.0 5e-11 >seq534 Length=453533 Score = 86.0 bits (94), Expect = 5e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || ||||||||||| || | |||||| || || || || |||| || | | ||| || Sbjct 346149 TTCTCAAGACCATATGCGAGAGCAGCGGCGGTAGGCTCGTTAACAACACGGAGAACGTTC 346208 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 || ||||||||| || ||||| || || ||||| | || || ||||| || || || Sbjct 346209 AGGCCAGCAATTTGACCGGCATCCTTGGTTGCTTGACGCTGGGAGTCGTTGAAGTAAGCG 346268 Query 518288 GGAACAGTAATAACGGC 518304 || ||||||| |||||| Sbjct 346269 GGGACAGTAACAACGGC 346285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780792675646894