Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq491 237 2e-57 seq594 125 9e-24 seq534 105 8e-18 >seq491 Length=196693 Score = 237 bits (262), Expect = 2e-57 Identities = 502/744 (67%), Gaps = 10/744 (1%) Strand=Plus/Minus Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463 ||||||| || || || || ||||| | |||||| || ||| | ||||||| Sbjct 78522 CTTTCTTGTGCTTGCGCTTGAACTCGTTGACGAAGTGGTTAACGAGACGGTTGTCGAAAT 78463 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 | |||||||||||||| || || || || || | ||||| || |||||||| | || | Sbjct 78462 CCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCCTCCTCGA 78403 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 || | | | || ||||| || || |||||||| || || || || || ||||| | Sbjct 78402 TGGTGAGGAGAGAGACATCGAAAGTTCCACCACCAAGATCGAAGATCAGGACGTTGCGCT 78343 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | | || ||||| || |||||||| ||||| || || || || || || || || | Sbjct 78342 CACCCTCGACCTTCTTGTCAAGACCGTAGGCGATGGCAGCGGCGGTAGGCTCGTTGATGA 78283 Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703 |||| || ||| || || || || | ||||| || || || || || || || | Sbjct 78282 TACGGAGGACGTTGAGTCCGGCGATGAGACCGGCATCCTTGGTAGCCTGACGCTGGGAGT 78223 Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| ||||| || ||||| || || || |||| |||| | |||||| || | | Sbjct 78222 CGTTGAAGTAAGCGGGGACGGTGACAACGGCGTTGTTGACGGTTCCACCGAGGTAAGCCT 78163 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823 | ||| | || ||| ||| || | ||| || || ||||| || | | || | | Sbjct 78162 CAGCGGTCTCGCGCATCTTGACGAGGATCATGGAGGAGATCTCCTCGGGTGTGAAGTCCT 78103 Query 7824 TCGTTTCACCGTTAAAATCAACTT--CAATCATGGGTTTATCCGCAGCACCGGGGATAAC 7881 | || || || || || || || | ||| | ||| || || | | | ||| | Sbjct 78102 TGGTCTCGCCCTTGAACTCGACCTGGCAAAC-TGGCTT--GCCTC--CCTTGTCGATGAT 78048 Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGAT 7941 ||| | | | | ||||| ||| | ||||||| || | ||||| | ||||| Sbjct 78047 CTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCATCGGCGAACTTGCGACCGAT 77988 Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGC 8001 |||||||| ||||| || || ||||| ||||||||||||| ||||||||| || || Sbjct 77987 CAGACGCTTGGCATCGAAGACGGTGTTGCTGGGGTTCATGGCGACTTGGTTCTTGGCGGC 77928 Query 8002 GTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATT 8061 || ||||| | ||| || | || || || || ||| |||| ||||| || || || Sbjct 77927 ATCACCGATCAAACGCTC---GGTGTCGGTGAAGGCAACGAACGAGGGGGTTGTGCGGTT 77871 Query 8062 CCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATA 8121 || |||||||| || ||||| || | |||||| | | ||| ||| ||||| || || Sbjct 77870 ACCCTGGTCGTTGGCGATAATCTCAATGCGGTCATCTCTGAAGATGCCTACGCAAGAGTA 77811 Query 8122 CGTTGTTCCTAAATCAATACCGAT 8145 || || || ||||| |||||||| Sbjct 77810 GGTGGTACCCAAATCGATACCGAT 77787 >seq594 Length=246236 Score = 125 bits (138), Expect = 9e-24 Identities = 226/327 (69%), Gaps = 5/327 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || ||||| | || || || || Sbjct 130316 TCGAAATCCTCACCACCCAAGTGGGTGTCACCAGCGGTAGAAAGAACCTCGAAAGCGCCA 130257 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | || ||||| || || || ||||| || || | || | | Sbjct 130256 CGGTCAATGGACAGGAGAGACACATCGAAGGTTCCTCCACCAAGATCGTA---GACAATG 130200 Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || || | | | ||||||| |||||||| |||| || || || ||||| || Sbjct 130199 ATC-TGGCGCTCACCGTCGGTCTTATCAAGACCGTAGGCGAGGGCGGCGGCGGTTGGCTC 130141 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | ||| || ||| ||| || || ||||| | | || || || || ||||||| Sbjct 130140 GTTGACAATGCGGAGAACGTTAAGTCCGGCAATGATACCGGCGTCCTTGGTGGCTTGTCT 130081 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| Sbjct 130080 CTGGTTGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACCTTCTTACCGAG 130021 Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782 || || || |||| || ||||| || Sbjct 130020 GTAAGACTCAGCGACCTCCTTCATCTT 129994 Score = 84.2 bits (92), Expect = 3e-11 Identities = 133/190 (70%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| || ||||| || | ||||||||| || ||||| |||| || || || | Sbjct 129757 GTGTTCTTTGGGTTTGCAGCGGCTTGGTTCTTTGCTGCGTCTCCGACCAGGCGCTCCTCC 129698 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | | || || |||||||| |||||||| ||| | ||||||||||| | | ||| Sbjct 129697 T---CGGTGAATGCGACGTAAGATGGGGTAATTCTGTGACCTTGGTCGTTGACGAGAATC 129641 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143 || ||| | | | | ||| ||||| || || || || ||||| |||||||||||| Sbjct 129640 TCGACGGCGCCACCCTTCATGACACCGACACAAGAGTAAGTGGTTCCCAAATCAATACCG 129581 Query 8144 ATTGCTTGAG 8153 || || ||| Sbjct 129580 ATAACTGGAG 129571 >seq534 Length=453533 Score = 105 bits (116), Expect = 8e-18 Identities = 200/291 (69%), Gaps = 14/291 (5%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||||||||| || || || ||| | ||||| || || | || Sbjct 346013 ATCGAAATCCTCACCACCCAAGTGAGTGTCACCATTGGTGGACTTGACCTCGAAAACGCC 346072 Query 7516 TCCTTCA--ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 |||| || | | | || | ||| || || || |||||||| || | | Sbjct 346073 --CTTCTGGATCTCGAGGACGGAGATATCGAAGGTTCCTCCACCCAGATCGTAGACAGCA 346130 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | | || | || || || ||| || ||||| || |||| ||| || || || || Sbjct 346131 ATGATCCTGTCCTCCTC------CTTCTCAAGACCATATGCGAGAGCAGCGGCGGTAGGC 346184 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTT 7691 || |||| || ||| ||| ||||||||||||||| ||| | ||||| || || |||| Sbjct 346185 TCGTTAACAACACGGAGAACGTTCAGGCCAGCAAT--TTGACCGGCATCCTTGGTTGCTT 346242 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGA 7742 | || || || ||||| ||||| || ||||| || || || |||| | ||| Sbjct 346243 GACGCTGGGAGTCGTTGAAGTAAGCGGGGACAGTAACAACGGCGTTCTTGA 346293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128044443160