Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq427 217 2e-51 seq529 123 3e-23 >seq427 Length=360985 Score = 217 bits (240), Expect = 2e-51 Identities = 898/1394 (64%), Gaps = 33/1394 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| | ||||| || ||| | || || || || || |||||||| Sbjct 265598 CCGCAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGCGAGGATATTGAGAAGACA 265657 Query 111672 TTGGAGACATACGACAAGATGTCC-CGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||||||| || ||||| | || |||| ||||| | ||||| ||||| Sbjct 265658 ATCGAGACATACAACCTCATGTCTTCCAAATAC-TTCACACACGCTTCCCCAACACTCTT 265716 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| || ||||||||| | || |||| || ||| | | | | |||||||| Sbjct 265717 CAATGCCGGTACACCACAGGCTCAGCTGTCGTCCTGCTTCTTGGTCGACATGAAGGAGGA 265776 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || || | ||| |||| |||||| ||||||||| || || Sbjct 265777 CAGTATTGAGGGTATCTATGACACACTCAAGACCTGTGCCATGATCTCAAAGACCGCCGG 265836 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAA 111909 |||||||| || |||||||| | || | |||| | || | || ||||| | Sbjct 265837 AGGTATCGGATTGAACATCCATCGTATCCGTGCCA-CTGGTGCATACATCGCTGGTACCA 265895 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | || | || ||||||| |||| ||||| ||||| || ||| ||| || | || | Sbjct 265896 ACGGAAACTCGAATGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCAAGATACG 265955 Query 111970 TAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 112026 | |||||| ||| ||| || || |||| |||| | ||||||||||||| Sbjct 265956 TTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTCGAGCCATGGCACG 266015 Query 112027 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC 112086 ||||| || | |||||||| || ||| | ||||| || | ||||| | || || Sbjct 266016 CGGATGTCTTTGAGTTCCTAGACTTGAGAAAGAACCACGGCAAGGAGGAAGTCCGTGCCC 266075 Query 112087 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 112146 | || | |||| |||||||||||| || ||||||||||||||| | |||||| ||| | Sbjct 266076 GTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGAAGAACG 266135 Query 112147 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGG 112206 | | ||| | ||| | || || || || || || | | || | || || | Sbjct 266136 GTGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGGTTGGCTGACGTTTACGGCGATG 266195 Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGA---GGAAGAAA---GTCGGGCGACTGCGACGG 112260 ||||||| || || ||| | ||||| ||| | || |||| ||| | || Sbjct 266196 AGTTTGAGGCGCTTTACGAGAGCTACGAGAGGGATGGAAAGGGTCGCAAGACCATCAAGG 266255 Query 112261 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 |||| || | ||| | | |||||| || ||||||| ||||| || | || | Sbjct 266256 -CCCAGAAGC-----TTTGGTACTCCATTCTCGAGGCTCAAACTGAGACAGGAAACCCTT 266309 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| ||||| || || || |||| ||||| || || ||||| | ||| || Sbjct 266310 TCATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATTC 266369 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || |||||||| || ||||| || | || | | | |||||| || |||| Sbjct 266370 GCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCTCCTGATGAGGTTGCCGTGT 266429 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACATTTGA 112498 ||||| | ||||| | || || || | |||||| ||| | | ||| | |||| || Sbjct 266430 GTAACTTGGCATCCCTTGCCCTGCCAACGTATGTTGAT--ATGGCCAACGGCACATACGA 266487 Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558 | | || || ||||| || || | ||| || ||| | |||| | ||||| Sbjct 266488 CTTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTCAAGAACTTGAACAAGATCATTGA 266547 Query 112559 TAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 | || | |||||||| | ||| | | | | || | | ||| | || ||| Sbjct 266548 TGTCAACTACTACCCCGTCGAAGAGGCCAGGCGCAGC-AACTTCCGCCACAGGCCCGTTG 266606 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 112677 | | |||||||| || || || |||| |||| | | |||| | || ||||| Sbjct 266607 CTGTTGGTGTCCAGGGCCTTGCTGATGCATTCTTGGCTCTCCGCCTTCCCTTCGATTCTC 266666 Query 112678 ACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGG 112737 ||| || ||| |||| | | || |||||||| || || |||| ||| |||| Sbjct 266667 CCGAGGCCAAGTTCCTCAACTCCCAGATCTTTGAGACCATTTACCACGGTGCT-TTGA-C 266724 Query 112738 CGAGTTCG--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 112795 | | || ||| |||| || | |||| | || || || | ||||| ||||||| Sbjct 266725 TGCTTCCGTAGAGCTGGCCCAGATCCATGGCACGTACGAGACGTACGAGGGATCTCCAGT 266784 Query 112796 TTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGAC 112853 || |||||| | ||| |||| || ||||||| || | || | | | | ||| Sbjct 266785 ATC-CAAGGGCGAGCTCCAATACGACATGTGGG-GCGTTACCCCTACCGACCTGTGGGAC 266842 Query 112854 TGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCA 112913 |||||| ||||||||| | |||||| || | ||| | || ||| ||| | | ||| Sbjct 266843 TGGGACTCTCTCAAGGCCCAGATCAAGCAGCACGGTGTCCGCAACTCTCTGCTCGTTGCA 266902 Query 112914 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 112973 || ||||| || ||||||||| | || || | || || || ||||| || || ||| Sbjct 266903 CCCATGCCCACTGCCTCCACCTCCCAGATTCTCGGCTTCAACGAGTGCTTCGAGCCATAC 266962 Query 112974 ACGACGAACATCTA 112987 || ||||||| || Sbjct 266963 ACCTCGAACATTTA 266976 >seq529 Length=148573 Score = 123 bits (136), Expect = 3e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| | |||||| | || |||| || || | ||||| || ||||||||| | | | Sbjct 107129 CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCCGATTGGGCTGTCAGG 107070 Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 ||| | | |||| | | | |||| || |||| ||| | || || || ||||| Sbjct 107069 TGGATCCAAGACAAGGATTC-TACCTTCGCCCAGCGTCTCGTTGCCTTCGCTGCCGTTGA 107011 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268 |||||| ||||||||||| |||||| | |||| ||||| |||||||| || ||||| Sbjct 107010 GGGTATTTTCTTCTCTGGCTCCTTCGCATCCATTTTCTGGCTTAAGAAGCGTGGCCTCAT 106951 Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 | | || || |||||| |||||||| || || || |||||||| |||||| Sbjct 106950 GGCTGGCCTTACCTTCTCTAACGAGCTCATTTCCCGCGACGAGGGTCTCCAC 106899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620737752191280