Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq427 215 6e-51 seq533 89.7 6e-13 seq334 89.7 6e-13 seq376 87.8 2e-12 >seq427 Length=360985 Score = 215 bits (238), Expect = 6e-51 Identities = 1170/1847 (63%), Gaps = 69/1847 (4%) Strand=Plus/Minus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGA 109466 || || || ||||| || || ||||| ||| |||||| || || | ||||| || | Sbjct 267321 CGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCA-GCCAGCAAAGTGCATGGATGT 267263 Query 109467 GAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526 || ||| | ||| || || ||| | ||| | ||||| |||||||| ||||| Sbjct 267262 GATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGAGACTGGGACTGATCAATGAA 267203 Query 109527 TCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGGCTAATTTCCCAGACAGT 109583 ||||| ||||| ||||| | ||||| | | || || || |||||||| || Sbjct 267202 GGCTCCACGGTCAGCAGCCATCTGGACGATGGTGCGCT---GGGAGATCTCCCAGACGGT 267146 Query 109584 CTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGC 109643 ||| || | |||||| || | || |||| ||||||||| || ||||| || | Sbjct 267145 CTTATAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTTTGGATGGAGCCTCCGTC 267086 Query 109644 CTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACC------GACC---TTTTTGAG 109694 | ||| | | |||||| | | ||||| ||||| |||| | ||||| Sbjct 267085 GGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGACCCATATCGACCAAGTCCTTGAG 267026 Query 109695 ATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTA 109754 |||| || | || || || || || ||||| || || || ||| Sbjct 267025 -----CAACCAGGGG----TTAACAACTTGGAACTCGCCAGCCAGGACACGACGCGAGTA 266975 Query 109755 GATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGC 109814 ||||| | ||||| || ||||| ||||| ||| ||| || || || | ||||| || Sbjct 266974 AATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAGGC 266915 Query 109815 TGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACG 109874 ||||||||||| || | ||| ||| ||| |||| ||| | | ||| | | | | Sbjct 266914 AGTGGGCATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTT 266855 Query 109875 CATTGCGTCCCAATCATAACGACCACTAAATT--TAGTCTCACCATCCCACATATCTGGT 109932 | | |||||| || |||| | | ||| | | ||||||| || | Sbjct 266854 GAGAGAGTCCCAGTC-------CCAC-AGGTCGGTAGGGGTAACGCCCCACATGTCGTAT 266803 Query 109933 TGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCG 109992 || || | |||| | | ||||| |||| | | ||||||||| || | | || | Sbjct 266802 TGGAGCTCGCCCTTGGATACTGGAGATCCCTCGTACGTCTCGTACGTGCCATGGATCTGG 266743 Query 109993 GCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTC 110052 |||| ||| ||||| | || | || || || |||||||| || || | || Sbjct 266742 GCCAGCTCTACGGAAGCAGTCAAAGCACCGTGGTAAATGGTCTCAAAGATCTGGGAGTTG 266683 Query 110053 ATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCA----CAAAGAATAAACACATCCGC 110108 | || | ||| | | ||||||||||| | | |||||| |||| || Sbjct 266682 AGGAACTTGGCCTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAAGAATG----CATCAGC 266627 Query 110109 TAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTC 110168 || ||||| ||||| | | ||| ||| | || | ||| ||| | || ||| Sbjct 266626 AAGGCCCTGGACACCAACAGCAACGGGCCTGTGGCGGAAGTTGCTGCGCCTGGCCTCTTC 266567 Query 110169 TACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGAT 110228 |||||||| ||||| || |||| | || | ||||| ||| || |||| Sbjct 266566 GACGGGGTAGTAGTTGACATCAATGATCTTGTTCAAGTTCTTGACAACAACCTGTGTGAC 266507 Query 110229 TTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGC 110288 || || || || | | | ||| | || | || ||| ||||| | || || || Sbjct 266506 CTCGTGAAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATATCAACATACGTTGGCAGGGC 266447 Query 110289 AATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGT 110348 || || || | || ||||| | | ||| || | | ||| || | ||| || || Sbjct 266446 AAGGGATGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAATCTCTGT 266387 Query 110349 ACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGC 110408 || | |||||| || |||| ||| | ||||||||| || ||| |||||| || Sbjct 266386 GCAAAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGC 266327 Query 110409 ATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 |||||| || |||||| | ||| | || || || || || | || |||||||| | ||| Sbjct 266326 ATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGAGTACCA 266267 Query 110469 TA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTA 110525 | | || | ||| || || |||| | | || ||| |||||| | ||| Sbjct 266266 AAGCTTCTG-GGCCTTGATGGTCTTGCG--ACCCTTTCCATCCCTCTCGTAGCTCTCGTA 266210 Query 110526 CAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGC-CTTGTCGGGACAGA 110584 | ||||||| || | ||||| || |||| | |||| || || || ||| || | Sbjct 266209 AAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCA-ACCCAGGGCACTCGTTGGGGCACA 266151 Query 110585 AGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCG 110644 ||||| ||| | || || |||||| | ||||||||| || || || ||||| | | Sbjct 266150 TGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAG 266091 Query 110645 CCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAA 110704 | |||| | ||||||| ||| | || || | || ||||| | | || | | Sbjct 266090 CGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCTAGGA 266031 Query 110705 AGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGAC 110764 | || | || ||||| ||||||||| |||| |||| |||| | || | | || Sbjct 266030 ACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACC---AGGGCGCT 265974 Query 110765 -----CCGCCT-GGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAA 110818 || ||| ||| ||| || | ||| ||| |||||||| | |||||| |||| | Sbjct 265973 TGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGA 265914 Query 110819 TTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTGG 110877 | |||| || | || || ||||| || | || || | ||||||| || ||| Sbjct 265913 TACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGCACC-AGTGGCACGGATACGATGG 265855 Query 110878 ATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACC 110936 || | || || ||||| || || ||| || ||||| ||| ||||||| | Sbjct 265854 ATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCT-TGAGTGTGTC 265796 Query 110937 ATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGG 110996 ||| ||||| ||||| || |||| || | | | ||||| || |||| ||||| Sbjct 265795 ATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGC 265736 Query 110997 ACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGG--GAC 111054 | || || || |||||||||||||| || | || || |||| | |||| ||| Sbjct 265735 CTGTGGTGTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA--GTATTTGGAAGAC 265678 Query 111055 ATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACT 111114 || ||||||||| |||| || | ||| | |||||||| || | ||||| Sbjct 265677 ATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACA 265618 Query 111115 CGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTC 111174 ||||| | ||| | || ||| | || | ||||||||||| ||| |||| || Sbjct 265617 CGCATAATCATGTGCTGCGGCCTCTCAGCAACCTTTCCATCAAGACGGAGAAGATACGAT 265558 Query 111175 TTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 |||| || ||||||| ||||||||| | | ||||||||| || Sbjct 265557 CTCTCCAGTGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTC 265511 >seq533 Length=101307 Score = 89.7 bits (98), Expect = 6e-13 Identities = 84/106 (79%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 136699 TCAAACGCACCGTTCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTC 136758 ||||| | ||| || ||||||||||||||||||||||||||| |||||||||||||| Sbjct 99857 TCAAAAACCCCGGTCGCTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTC 99798 Query 136759 ACGGGTTCGAGCCCCGTTGGGAACAGCTTTTAGAT-ATATTTTTTG 136803 || |||||| || ||| | || ||| | || |||||||||| Sbjct 99797 GCGAGTTCGACCCTCGTAGTGACCAGATCACGAATCATATTTTTTG 99752 >seq334 Length=151056 Score = 89.7 bits (98), Expect = 6e-13 Identities = 167/239 (70%), Gaps = 10/239 (4%) Strand=Plus/Minus Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| || ||||| || ||||| || |||||||| ||| | ||||| |||| || | | Sbjct 54665 GAATAGCTCACGGACGCGCTTGGCACCAACACCAACGTAGATCTCGTCGAA-TTCACTAC 54607 Query 11796 AGAACACTGAAT--GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTC 11853 | ||| |||| ||| || || | ||| ||||| | || ||||| ||||||||| Sbjct 54606 CGGACA-TGAAGAAGAATGGGACGCCCGCCTCGCCAGCAACTGCACGAGCCAGGAGAGTC 54548 Query 11854 TTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACT--TC 11911 || || ||||| || | |||| | || || | || || | |||| ||||| || Sbjct 54547 TTTCCAGTACCGGGGGGACCAACAAGGAGAACACCCTTAGGAAGCTTGCCACCAAGAGTC 54488 Query 11912 CA-AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 | || | | |||| ||||| ||||||||||||| ||| | ||||||||||| || Sbjct 54487 GAGAATTTTC---CAGGGTTCTTTAGGAAGTCCACAAGCTCTTGCAGTTCCTCCTTCGC 54432 >seq376 Length=549212 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 466694 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 466635 Query 136777 GGGAACAG 136784 | || ||| Sbjct 466634 GTGACCAG 466627 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 467257 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 467198 Query 136777 GGGAACAG 136784 | || ||| Sbjct 467197 GTGACCAG 467190 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 465739 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 465798 Query 136777 GGGAACA 136783 | || || Sbjct 465799 GTGACCA 465805 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 467540 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 467481 Query 136777 GGGAACA 136783 | || || Sbjct 467480 GTGACCA 467474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588971590042200