Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq427 235 6e-57 seq529 105 8e-18 >seq427 Length=360985 Score = 235 bits (260), Expect = 6e-57 Identities = 1150/1807 (64%), Gaps = 37/1807 (2%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGA 105648 ||||| |||||||| ||||||||||| || | ||||| || || | ||||| || | Sbjct 267321 CGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCA-GCCAGCAAAGTGCATGGATGT 267263 Query 105649 GAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAA 105708 || |||| ||| ||||| | |||| | || | | || ||| |||||||| Sbjct 267262 GATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGAGACTGGGACTGATCAATGAA 267203 Query 105709 GCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGT 105765 | ||||| | || ||||| | | || | | | || | || ||||| || || Sbjct 267202 GGCTCCACGGTCAGCAGCCATCTGGACGA--TGGTGCG-CTGGGAGATCTCCCAGACGGT 267146 Query 105766 GCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGC 105825 ||||| |||||| || | ||||| | | ||| ||||| || || || || | Sbjct 267145 CTTATAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTTTGGATGGAGCCTCCGTC 267086 Query 105826 CTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGAC 105885 || ||| | | |||||| | | ||||| ||||| || | | || |||| Sbjct 267085 GGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGACCCATATCGACCAAGTCCTTGAG 267026 Query 105886 GAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGT 105945 | ||| |||| ||||| || || ||| | | | || ||||||| Sbjct 267025 CAACCAGGGGTTAACAACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAAATGTTCGA 266966 Query 105946 CGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCAT 106005 ||||| || || ||||| || || || | || || | ||||||||| || ||||| Sbjct 266965 GGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAGGCAGTGGGCAT 266906 Query 106006 TGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATC 106065 ||||| | | ||| ||| || | ||| | | |||||| | |||||||| || Sbjct 266905 GGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGTC 266846 Query 106066 CCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGG 106124 |||||| | | | | || | || ||||||| || |||| ||| | || | || Sbjct 266845 CCAGTCCCACAGGTCGGTAGGGGTAACGC-CCCACATGTCGTATTGGAGCTCGCCCTTGG 266787 Query 106125 ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 106184 | ||||| ||||| | ||||| || | || ||| | |||| || | | Sbjct 266786 ATACTGGAGATCCCTCGTACGTCTCGTACGTGCCATGGATCTGGGCCAGCTCTACGGAAG 266727 Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244 | || | |||| || ||||| |||||||| | | || | |||||| || Sbjct 266726 CAGTCAAAGCACCGTGGTAAATGGTCTCAAAGATCTGGGAGTTGAGGAACTTGGCCTCGG 266667 Query 106245 CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAAC 106304 ||||| || | |||| | ||| |||| || || || || ||||| | | Sbjct 266666 GAGAATCGAAGGGAAGGCGGAGAGCCAAGAATGCATCAGCAAGGCCCTGGACACCAACAG 266607 Query 106305 CAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTC 106361 ||| || ||||| || | || | ||| | ||| ||||| || | || Sbjct 266606 CAACGGGCCTGTGGCGGAAGTTGC---TGCGCCTGGCCTCTTCGACGGGGTAGTAGTTGA 266550 Query 106362 TGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCAT 106421 ||||||| ||| | || ||| ||||| || ||||| || ||||| || | Sbjct 266549 CATCAATGATCTTGTTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGAAGCTTCTGGA 266490 Query 106422 AATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGC 106481 | || | |||| | | || |||||| |||| ||||| | |||||||| || | Sbjct 266489 AGTCGTATGTGCCGTTGGCCATATCAACATACGTTGGCAGGGCAAGGGATGCCAAGTTAC 266430 Query 106482 AAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCT 106541 | || || |||||| | | | |||||| | ||| ||||| || | |||||| || Sbjct 266429 ACACGGCAACCTCATCAGGAGCAGAGTACTCGACAATCTCTGTGCAAAGGTTGGAGCTGC 266370 Query 106542 TAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGT 106601 ||| || || | ||||| ||||| ||||| |||||| ||||||||||| |||||| Sbjct 266369 GAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAGCATGA 266310 Query 106602 AGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGT 106660 | || | || ||||| || || | || |||||| | | ||| | | || | | || | Sbjct 266309 AAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTG- 266251 Query 106661 ACAATGGCGTTG---GCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCC 106717 |||| ||| || ||| ||| |||||| | ||| || || |||||||| Sbjct 266250 ---ATGGTCTTGCGACCCTTTCCATCCCTCTCGTAGCTCTCGTAAAGCGCCTCAAACTCA 266194 Query 106718 TCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCA 106777 || || |||| | | || || || || || || | || | ||| | ||| Sbjct 266193 TCGCCGTAAACGTCAGCCAACCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCG 266134 Query 106778 CCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-T 106836 || |||||| ||||||||||| || || || ||||| || | | || | || | Sbjct 266133 TTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAGTCACGG 266074 Query 106837 ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGC 106896 ||| || | || || | || ||||| || || || |||||||| | || |||||| Sbjct 266073 GCACGGA-CTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCTAGGAACTCAAAGACATCCGC 266015 Query 106897 GTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTA 106952 |||||||||||| | |||| |||| || || | | | | ||| |||| | | Sbjct 266014 GTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTG-CCACCTTGGTCAA 265956 Query 106953 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 107012 | || | || ||| ||| || ||||| ||||| |||| ||||||| || | || | Sbjct 265955 CGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGAGTTTCCGT 265896 Query 107013 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 107072 | || || || | | |||| | | | |||||||| || || ||||| | Sbjct 265895 TGGTACCAGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCGATACCTC 265836 Query 107073 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 107132 | || ||||||||| ||||| | | || || |||||||||| | || || Sbjct 265835 CGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCAATACTGT 265776 Query 107133 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGA 107192 ||||||| || ||| | |||||| |||| ||| | ||||||||| ||||||| Sbjct 265775 CCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGTGTACCGGCATTGA 265716 Query 107193 AGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTATGTCTCCAA 107250 |||| ||||| | ||||| |||| || |||| ||||| || ||||||||| | Sbjct 265715 AGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTATGTCTCGAT 265658 Query 107251 GACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 ||||| || || ||||| ||||| | || |||||||||| ||||| || || Sbjct 265657 TGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCATGTGCTGCGG 265598 Query 107311 TGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGAC 107369 | || | | ||||| || || ||||||| | || |||| || || |||| | Sbjct 265597 CCTCTCAGCAACCTTTCCATCAAGACGGAGAAGATACGATC-TCTCCAGTGTCTTGAAGC 265539 Query 107370 CAAAGTA 107376 ||||||| Sbjct 265538 CAAAGTA 265532 >seq529 Length=148573 Score = 105 bits (116), Expect = 8e-18 Identities = 203/297 (68%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || |||||||| || || || |||||| ||||| | |||||| || Sbjct 106899 GTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGGCCAGCCATGAGGCC 106958 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| |||| | ||| || || |||||||| |||||||| || Sbjct 106959 ACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAAATACCCTCAACGGC 107018 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463 || || |||| || |||| |||||||| || | |||| | | ||| | | | Sbjct 107019 AGCGAAGGCAACGAGACGCTGGGCGAAGG-TAGAATCCTTGTCTTGGATCCACCTGACAG 107077 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCT 117523 |||| | |||||||||| || || || | || | |||||| | || | | | Sbjct 107078 CCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC 107137 Query 117524 TTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAA 117580 || || | ||||| |||||| ||||||| | || ||||| ||| | |||| Sbjct 107138 GTTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAGGGAGTATGTCTCGGCGTGAA 107194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976382518760