Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq389 93.3 6e-14 >seq389 Length=438308 Score = 93.3 bits (102), Expect = 6e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 197029 TCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCGGGATTG 197088 || ||||| ||||| || ||||| || || | | |||||| || | || ||| ||| Sbjct 328587 TCTTCGCTGAAGCCGGTGCCGATGTTGCAGACTGTTTCGTAGCGCTCGGTGGAGGGGTTG 328528 Query 197089 TAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCT 197148 || || |||||||||||||||||||| | ||| | ||||||| |||| | || | Sbjct 328527 TAGCACGCGAGTAAGAAAGCGCCGTAAACGCTCGTGCGCTTTCCCTTGCCGTGGTAGGCG 328468 Query 197149 CCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTG 197208 || | || || ||||| || | |||| | || | | |||||||||||| | ||| Sbjct 328467 CCTAGGACGACAAGATCGAGCGAATCGCCGATGCCAGCGAGGTAATCTTTCTTGATCTTG 328408 Query 197209 AGCCAG 197214 |||||| Sbjct 328407 AGCCAG 328402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676724532987120