Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq450 120 2e-22 seq482 84.2 2e-11 >seq450 Length=136939 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || ||| ||| || ||||| ||||| || || | | || | || ||| Sbjct 111296 ACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGGCCATCCTCC 111237 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 |||||||| || || || ||||| ||||| || |||| |||| ||||||||||| | Sbjct 111236 AACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 111177 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | || || || | |||||||| | ||||||||| || Sbjct 111176 ATCTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTG 111117 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | ||| || |||||||||||||| Sbjct 111116 CCCGTAAGAGTCTTGACAAAAATCTGCAT 111088 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| || ||||| |||||||| || ||| | || |||| || Sbjct 111068 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCCTCA 111009 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||||||| || || ||||| ||||| || |||| |||| |||||||||||| | Sbjct 111008 AGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 110949 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || |||| ||| ||||||| || || || || Sbjct 110948 ATCTTGGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 110889 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || || || |||||||| Sbjct 110888 CCAGTGAGGGTCTTAACGAAGATCTGCAT 110860 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||||| ||| ||| || ||||| ||||||||||| ||| | || | || || | ||| Sbjct 111519 ATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAGACAGAGTACGGCCATCCTCTAGCTG 111460 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || ||||| || || ||||| || |||| || | ||||||||| || ||||| Sbjct 111459 CTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTT 111400 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || || | | | | || |||| ||| ||||||| |||||| || ||||| || Sbjct 111399 AGACTTGACGTTATCGATGGTATCCGACGACTCGACCTCCAACGTAATTGTCTTTCCGGT 111340 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | ||| || || || || ||||| Sbjct 111339 GAGAGTCTTGACGAAGATTTGCAT 111316 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/221 (69%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGA---CTT 48605 || || | |||||| || || |||||||| || || || ||||| || || ||| Sbjct 111761 AGACGGAGCACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTT 111702 Query 48606 CGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCC 48665 | ||| ||| | |||||||| ||||| ||||| ||||| || |||| || | ||| Sbjct 111701 CCATCCTCG---AGTTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCC 111645 Query 48666 TCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACC 48725 ||||| || |||||| || || | | | || || | ||| ||||| | Sbjct 111644 TCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGA 111585 Query 48726 GTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || |||||||||| || || || ||||||||||| Sbjct 111584 GTAATAGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 111544 >seq482 Length=177890 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||| || || || ||||| || || || | || | || || Sbjct 107143 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCG 107084 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| ||||| || |||| ||||| || |||| ||||| ||||||||||| Sbjct 107083 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 107024 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | || || || | ||||||||| | || || || || Sbjct 107023 ATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCCACCTCAAGGGTGATAGTCTTG 106964 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||||| || || || || || ||||| Sbjct 106963 CCCGTCAGGGTCTTCACGAAGATTTGCAT 106935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380934819036477