Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq427 208 1e-48 seq529 178 2e-39 >seq427 Length=360985 Score = 208 bits (230), Expect = 1e-48 Identities = 1038/1640 (63%), Gaps = 66/1640 (4%) Strand=Plus/Minus Query 212577 GCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCCCAGCCGTGC 212633 |||||| |||| || || ||||||||||||||||| ||||| ||| |||||| Sbjct 267333 GCAGCCATGGTACGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTT---CCAGCCAGCA 267277 Query 212634 ATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGT 212693 | |||||| | ||||| |||| || | | || |||| | | |||| Sbjct 267276 AAGTGCATGGATGTGA---TCTT--GCCCATTGTTG-GGTCCTTCATGTGG--------- 267232 Query 212694 AGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATA 212753 | ||| || ||||| ||| || ||||| | | | |||||| ||||| | | ||| Sbjct 267231 ATGTTGAGAGACTGGGACTGATCAATGAAGGCTCCACGGTCAGCAGCCATCTGGACGATG 267172 Query 212754 TCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCG 212813 | |||||||| |||||| |||||||| ||| | |||| ||| | |||| | | Sbjct 267171 GTGCGCTGGGAGATCTCCCAGACGGTCTTATAGAGGGCCTTGATGTCGGCAGGGATGTTG 267112 Query 212814 GGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCG--CATGTCCTCGTTCC 212871 |||||||| || | || || | || | | | ||| | ||||| || || Sbjct 267111 GGGATGTTTTGGATGGAGCCTCCGTCGGCGATGA--TGCGGTTCTTCATGTTGTCAGACC 267054 Query 212872 AGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTG 212931 | || ||| | ||| | ||||| || ||||| || | ||||| || || | Sbjct 267053 ACAGACCCATATCGACCAAGTCCTTGAGCAACCAGGGGTTAACAACTTGGAACTCGCCAG 266994 Query 212932 AGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCA 212991 || || | | | ||||| ||| || ||||| ||||||| || ||||||| || | Sbjct 266993 CCAGGACACGACGCGAGTAAATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGA 266934 Query 212992 GAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGT 213051 ||||||| | ||| ||| ||||||||||| || || || ||| ||| | || |||| Sbjct 266933 GAATCTGGGAGGTGGAGGCAGTGGGCATGGGTGCAACGAGCAGAGAGTTGCGGACACCGT 266874 Query 213052 GCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCT 213111 ||| ||| || | || |||||||||| |||||| Sbjct 266873 GCTGCTTGATCTGGGCCTTGAGAGAGTCCCAGTCCCA---------CAGGTCGGTAGGGG 266823 Query 213112 TCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGG 213171 | ||| ||||||||| | || | ||| ||| || || |||| ||| | Sbjct 266822 TAACGCCCCACATGTCGTATTGGAGCTCGCCCTTGGATACTGGAGATCCCTCGTACGTCT 266763 Query 213172 AGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGG 213231 ||| | |||||| || ||||||||| ||| || || ||| ||| ||| |||| Sbjct 266762 CGTACGTGCCATGGATCTGGGCCAGCTCTACGGAAGCAGTCAAAGCACCGTGGTAAATGG 266703 Query 213232 TTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGC 213291 | ||||| |||| |||||| ||||||||| || || |||||| | | Sbjct 266702 TCTCAAAGATCTGGGAGTTGAGGAACTTGGCCTCGGGAGAATCGAAGGGAAGGCGGAGAG 266643 Query 213292 GTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAG 213351 ||| ||||||| || |||||||| || | | | ||| ||||| | | ||| Sbjct 266642 CCAAGAATGCATCAGCAAGGCCCTGGACACCAACAGCAACGGGCCTGTGGCGGAAGTTG- 266584 Query 213352 ACTTGGA--GCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409 || | | ||| || | |||||| ||||| || ||||||||||| | ||| Sbjct 266583 -CTGCGCCTGGCCTCTTCGACGGGGTAGTAGTTGACATCAATGATCTTGTTCAAGTTCTT 266525 Query 213410 GGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGT---C 213466 | | || | ||||| | | || | || | || |||| |||| | Sbjct 266524 GACAACAACCTGTGTGACCTCGTGAAGCTTCTGG------AAGTCGTATGTGCCGTTGGC 266471 Query 213467 C---TGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGA 213523 | | ||| || |||||||| | | |||| ||| || ||||| ||||| | || Sbjct 266470 CATATCAACATACGTTGGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCAGG 266411 Query 213524 GTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTG 213583 | | |||||| | ||||| ||||| |||||| || || ||||| || ||||||| Sbjct 266410 AGCAGAGTACTCGACAATCTCTGTGCAAAGGTTGGAGCTGCGAATGGTACCGAGGTTCTT 266351 Query 213584 GTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAG 213643 ||||| ||| |||| || ||||||||| |||||| | ||| || ||||| Sbjct 266350 CTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGT 266291 Query 213644 CTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCC 213703 || | | | || || | ||| || | | |||||||| | | | ||| Sbjct 266290 TTGAGCCTCGAGAATGGAGTACCAAAGCTTCTGGGCCTTGATGGTCTTGCGACCCTTTCC 266231 Query 213704 GGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAG 213763 | | |||||| ||||| ||| | | || || | ||| | || ||| Sbjct 266230 ATCCCT---CTCGTAGCTCTCGTAAAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCAA 266174 Query 213764 TCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCA 213822 || || || ||| ||||||||| ||||||| |||| | |||| || | || || Sbjct 266173 CCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCA-ACACGCTTCA 266115 Query 213823 TGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTC 213882 |||| || ||||||| ||| || ||| ||||| ||| | || | || ||| | Sbjct 266114 TGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGC 266055 Query 213883 CAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGA 213942 | ||| || | || ||||| || ||||||| ||||||||||| ||||| | ||||| Sbjct 266054 CGTGGTTCTTTCTCAAGTCTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGA 265995 Query 213943 TGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGA 213999 |||| || || || | || | ||||| || ||||| || || || |||||| Sbjct 265994 TGGCGAAAGCACCAGGGCGCTTGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGA 265935 Query 214000 AGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGC 214059 ||| ||| || | ||| || | || || || | ||||||||| || || || || | | Sbjct 265934 AGACGCGGAGCATGGGAACGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGCAC 265875 Query 214060 CGGAGGCCCTCAGGTTGCTCATGGA----GAGCCCTATGCCACCGGCGTACTTGGAGATC 214115 | | ||| | || | | ||||| | || || || |||||| ||| |||||| Sbjct 265874 CAGTGGCAC---GGATAC-GATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATC 265819 Query 214116 ATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGC 214175 ||||| ||| | | | || || ||| || | || ||||| || | | || | | Sbjct 265818 ATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACC 265759 Query 214176 AAGAAGCAGCTCGAGAGCTG 214195 ||||||||| ||| ||||| Sbjct 265758 AAGAAGCAGGACGACAGCTG 265739 >seq529 Length=148573 Score = 178 bits (196), Expect = 2e-39 Identities = 556/851 (65%), Gaps = 30/851 (4%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| || || | ||||| |||||||| ||||| || ||| |||||||||||| Sbjct 106597 TGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTAGTCTTACCGGCCAGGGAGATGTTCTCC 106656 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAG 47958 |||||| ||| ||||||| | || || | | | || ||| | ||||| Sbjct 106657 ATGAAGTCGAATGGGTTGGCCGATTTGTAGAACT-TCTCGTTGCCGAGAGAAAGAAGCAG 106715 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 || |||||| |||| ||||||| ||| | | || ||||||||| | || | Sbjct 106716 CCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCG- 106774 Query 48019 CACGGGCAAA-GCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| || || |||| || || ||||| | ||| || || || || | | | Sbjct 106775 CACAGGGAAGTGCCTCGGTCAGGAACTCTTGCTCAATGCTAACAGCCTCGGTAATGACGT 106834 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCAT------AGAGCATGC 48131 | ||| | || | || ||| || |||| || | |||| | || Sbjct 106835 CTTGGACG---GCCT-----GCTTGCTTGGGC-GGTGTTTAAGGTGAGAGAAGAGGAGGC 106885 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 |||| ||||| |||| | || ||||| ||| |||||| |||| |||||| || | Sbjct 106886 AGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGGC 106945 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||| ||||| || | || || ||||||||||| | ||||| |||||||||||||| | Sbjct 106946 CAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAAA 107005 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 | ||||| || || ||||| || ||| | || |||| | || | ||||||| || Sbjct 107006 TACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAGGTAGAATCCTTGTCTTGGA 107065 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGA 48371 |||| | ||||| || ||||||||||||||||| || || ||||| ||||| || Sbjct 107066 TCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGA 107125 Query 48372 AGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACA 48428 |||| | ||| | | || ||| | || || | |||| || | ||| Sbjct 107126 AGAGGTATGTGCGTTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAG---GGAGTATG 107182 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| | ||| | ||||| || || ||||| ||||||||| | ||| || | Sbjct 107183 TCTCGGCGTGAATGTTCTCGATCATAATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 107242 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 || || || || ||| | ||| || || ||||| ||||| || || || || || | Sbjct 107243 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCCGACGCGG 107302 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTC 48604 | ||||| || || || || | ||| | |||||| | || | |||| || ||| Sbjct 107303 CGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAG-GCGGTTGTTC 107361 Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664 ||| | || | ||| ||| || || | || || | |||||||| || || || Sbjct 107362 CAGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGAGGCCTCCGCC 107421 Query 48665 TTTTTGTACAT 48675 || |||||||| Sbjct 107422 TTCTTGTACAT 107432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931525825148160