Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq427 242 7e-59 seq529 168 1e-36 >seq427 Length=360985 Score = 242 bits (268), Expect = 7e-59 Identities = 827/1265 (65%), Gaps = 39/1265 (3%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 |||| ||| ||||||| ||||||||||||||| |||||| ||||||||||||| Sbjct 266724 GTCAAAGCACCGTGGTAAATGGTCTCAAAGATCTGGGAGTTGAGGAACTTGGCCTCGGGA 266665 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 ||| |||||| | || || | || | || || || ||||| || || | | | Sbjct 266664 GAATCGAAGGGAAGGCGGAGAGCCAAGAATGCATCAGCAAGGCCCTGGACACCAACAGCA 266605 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCG-CTTCTGGCACGGGATAAAAGTTGACGTC 221595 | ||||||||| | |||| ||| | | | ||| ||||| || ||||||| || Sbjct 266604 ACGGGCCTGTGGCGGAAGTTGCT-GCGCCTGGCCTCTTCGACGGGGTAGTAGTTGACATC 266546 Query 221596 GATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATT 221655 || | ||||| | |||| |||| ||| |||| || | || || | || Sbjct 266545 AATGATCTTGTTCAAGTTCT------TGAC---AACAACCTGTGTGACCTCGTGAAGCTT 266495 Query 221656 GAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTT--AGGGCAACGCTG 221713 | || ||| | ||| | || ||| | |||| ||||||| | Sbjct 266494 ---CTGGAAGTCGTATGTGCCGTTGGCCATATCAACATA--CGTTGGCAGGGCAAGGGAT 266440 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 |||| |||||||||||| ||||| || | |||| | |||||||| || ||| Sbjct 266439 GCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAATCTCTGTGCAAAGG 266380 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 ||| || ||||| || |||| || || || |||||| ||| ||| |||||| Sbjct 266379 TTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTG 266320 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 || ||||| || || || ||||| |||||| | ||||| || ||| || | | Sbjct 266319 TACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGAGTACCAAAGCT-T 266261 Query 221894 CTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCCGGTATAGAGCAT 221952 |||| || | ||||| | | | || || | || || | || ||| Sbjct 266260 CTGGGCCTTGATGG--TCTTG-CGACCCTTTCCATCCCTCTCGTAGCTCTCGTAAAGCGC 266204 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012 ||||||| || ||||| | || ||| || || ||| | ||| ||||| || | Sbjct 266203 CTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGTTGGGGCACATGAGGGT 266144 Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAA 222072 ||||| ||| | | || | || ||||||||| ||||||||||| || || | || Sbjct 266143 CCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAA 266084 Query 222073 GAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAA 222132 | || | || || |||||| ||||| ||| || |||| || | |||||||| Sbjct 266083 CAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCTAGGAACTCAAA 266024 Query 222133 AATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACC 222192 | || |||||||| ||||| | |||| ||| | ||| || || |||||||||||||| Sbjct 266023 GACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACC 265964 Query 222193 CTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGG 222251 || || || || | ||| | |||||||| ||| || | || || | || || | Sbjct 265963 TTGGTCAACGTATCT-TGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCG 265905 Query 222252 ATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGGCAG-ACA 222308 | |||||||| || ||||| ||||| ||| | || ||| ||| | || Sbjct 265904 AGTTTCCGTTGGTACCAGCGATGTATGCACCAGTGGCAC---GGATACGATGGATGTTCA 265848 Query 222309 TGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGC 222368 |||||||| |||||| || ||||||||||| ||| ||||||| ||||| ||| | Sbjct 265847 ATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATAC 265788 Query 222369 CCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG-ATTTGGTG 222427 |||| ||| ||||||||| | || | || || || ||||||| ||||| | |||| Sbjct 265787 CCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGT- 265729 Query 222428 GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCG 222487 | || ||| || || || || || |||||||| ||||| |||||| || | | Sbjct 265728 GTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTG 265669 Query 222488 TACGTCTCTA-CGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTA 222546 || ||||| | | || | | || | || |||||||| || || | ||| Sbjct 265668 TATGTCTCGATTGTCT-TCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAAT 265610 Query 222547 CATGTACTGGGGCCTCTCCACAGGACCCTTGGAGCTGGA--GAGCAGGTACGATTTTTCC 222604 ||||| ||| |||||||| || ||| || | | || ||| || |||||| | ||| Sbjct 265609 CATGTGCTGCGGCCTCTCAGCA--ACCTTTCCATCAAGACGGAGAAGATACGATCTCTCC 265552 Query 222605 AGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCC 222664 || |||||||| |||||||| | | || || || | | ||| || ||||| | || Sbjct 265551 AGTGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGTAAAGGACGGCAGAGTTG 265492 Query 222665 AGCTC 222669 ||||| Sbjct 265491 AGCTC 265487 >seq529 Length=148573 Score = 168 bits (186), Expect = 1e-36 Identities = 549/854 (64%), Gaps = 16/854 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | ||| |||||| || || ||||||||||| Sbjct 107441 ATCTGGCAGATGTACAAGAAGGCGGAGGCCTCTTTCTGGACAGCAGAGGAGATTGATCTC 107382 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 |||||||| | ||| |||| || | ||| ||||| ||| | ||| | Sbjct 107381 TCCAAGGACCTCCACGACTGGAACAACCGCCTCAACGACGATGAGCGCTACTTCATCTCC 107322 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || || || || || || || |||||||| || |||| | Sbjct 107321 CACGTTCTCGCTTTCTTCGCCGCGTCGGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 107262 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| ||| || || || | || ||| || |||||||||||||| || ||| Sbjct 107261 TTCAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATTATGATC 107202 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||| | ||| || || || || || || ||||| | || Sbjct 107201 GAGAACATTCACGCCGAGACATACTCC---CTCCTCATTGACACATACATCAAGGAGCAA 107145 Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 || | | | || || || |||||||||| ||| || ||||||||| |||||| Sbjct 107144 GCTCAACGCACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGC 107086 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||| | | ||||||| | | || |||| || | | |||| || || || Sbjct 107085 CGATTGGGCTGTCAGGTGGATCCAAGACAAGGATTCTACCTTCGCCCAGCGTCTCGTTGC 107026 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 ||| ||||| || ||||| || || ||| || || || || |||| |||||||| || Sbjct 107025 CTTCGCTGCCGTTGAGGGTATTTTCTTCTCTGGCTCCTTCGCATCCATTTTCTGGCTTAA 106966 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || || |||| | || || ||| || ||||||||||| | | |||||||| Sbjct 106965 GAAGCGTGGCCTCATGGCTGGCCTTACCTTCTCTAACGAGCTCATTTCCCGCGACGAGGG 106906 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCA 26069 |||||||| || || |||||||| |||| | | ||| | ||| || || Sbjct 106905 TCTCCACACTGACTTCGCCTGCCTCCTCTTCTC---TCACCTTAAACAC-CGCCCAAGCA 106850 Query 26070 AG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNN 26128 || || ||||| | |||| | |||||||| || ||| | ||||| | Sbjct 106849 AGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTTAGCATTGAGCAAGAGTTCCTGACCG 106790 Query 26129 NNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGT 26188 | ||||||||| || | |||| ||||||||||||| Sbjct 106789 AGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGAGT 106730 Query 26189 ATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248 || |||||| ||||| || || || | |||||| || | |||| Sbjct 106729 TCGTCGCCGACAGGCTGCTTCTTTCTCTCGGCAACGAGAAGTTCTACAAATCGGCCAACC 106670 Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308 | |||||||| ||||| ||||| || ||| || ||||| |||||||| || ||| | | Sbjct 106669 CATTCGACTTCATGGAGAACATCTCCCTGGCCGGTAAGACTAACTTCTTCGAGAAGCGCG 106610 Query 26309 TCGGCGACTATCAA 26322 |||||||||| ||| Sbjct 106609 TCGGCGACTACCAA 106596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928837845274560