Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq444 122 1e-21 seq529 114 2e-19 seq427 113 6e-19 >seq444 Length=577972 Score = 122 bits (134), Expect = 1e-21 Identities = 102/125 (82%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 ||||||||| | ||||| ||| |||||||||||||||||||||| |||||||| | || Sbjct 77252 CTCTTTGAGATCATCCTGGCCTCCAACTACCTCGACATCAAGCCCCTGCTCGACGTCGGC 77193 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||||| | ||||| || ||||||||||| ||| || |||||||| | ||||| ||| Sbjct 77192 TGCAAGACGGTGGCGAATATGATCAAGGGGAAGAGCCCGGAGGAGATTAGGAAGACGTTT 77133 Query 1592288 AACAT 1592292 || || Sbjct 77132 AATAT 77128 >seq529 Length=148573 Score = 114 bits (126), Expect = 2e-19 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| ||||| |||||| |||||| ||||| ||||| || | || ||||| |||||| Sbjct 106599 GTAGTCGCCGACGCGCTTCTCGAAGAAGTTAGTCTTACCGGCCAGGGAGATGTTCTCCAT 106658 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||||| || |||||| ||| ||| ||||| || ||||| | Sbjct 106659 GAAGTCGAATGGGTTGGCCGATTTGTAGAACTTCTCGTTGCCGAGAGAAAGAAGCAGCCT 106718 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||||||||| ||||| ||||| || ||| | | |||||||||||||| ||||| Sbjct 106719 GTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACA 106778 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924 || || | |||| ||| ||||||| ||| || || |||||| Sbjct 106779 GGGAAGTGCCTCGGTCAGGAACTCTTGCTCAATGCTAACAGCCTCG 106824 Score = 109 bits (120), Expect = 7e-18 Identities = 175/249 (70%), Gaps = 3/249 (1%) Strand=Plus/Plus Query 869635 GTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGAC 869694 ||| ||||||||||| || ||||| ||||| ||| | | |||| | |||||| Sbjct 107190 GTGAATGTTCTCGATCATAATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATTTGGAC 107249 Query 869695 CTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAA 869754 ||| | |||| || || ||||||||| || || ||||| |||||||| || Sbjct 107250 CTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCCGACGCGGCGAAGAA 107309 Query 869755 AGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGGAC 869811 ||| || ||||| ||| |||| |||||| |||||| ||| ||| ||||| | Sbjct 107310 AGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGGCGGTTGTTCCAGTCGTG 107369 Query 869812 GGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 | ||| | ||| || | |||||| || ||||||| |||||||| ||||| ||||| Sbjct 107370 GAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGAGGCCTCCGCCTTCTTGTA 107429 Query 869872 CATCTCCCA 869880 ||||| ||| Sbjct 107430 CATCTGCCA 107438 >seq427 Length=360985 Score = 113 bits (124), Expect = 6e-19 Identities = 179/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| ||||| | || |||| ||| ||||||||||||||||| |||| || || || Sbjct 265962 TGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGAG 265903 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | |||||||| || || | ||| || || | ||| || | || | || ||| Sbjct 265902 TTTCCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCG 265843 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || || ||||| | ||| ||||| | || || ||||| ||||| ||||| ||||| Sbjct 265842 ATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCA 265783 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || ||| |||||||||| || | ||||| ||||| || | || | || ||| Sbjct 265782 ATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGTGTACCG 265723 Query 1630306 GCGTTGAAGAGCGTGGG 1630322 || |||||||| || || Sbjct 265722 GCATTGAAGAGTGTTGG 265706 Score = 111 bits (122), Expect = 2e-18 Identities = 253/381 (66%), Gaps = 6/381 (2%) Strand=Plus/Plus Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180 || || |||||| | || ||| || || ||||| || |||| ||||| |||||| Sbjct 317782 GTGGGATGCATCGTTGATGGCTGCCCCCCAGGCATGGAGCTCACCGAAGCCGATATCCAG 317841 Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240 || ||| || || ||||||||||||||| | || || | ||||| ||| ||||| Sbjct 317842 CCCCAGATGACCCGTCGCCGACCGGGCCAGAGTGCTCTGACAACGCCCCGCGACGAGAAG 317901 Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGC 18300 || | ||| || || || ||||| ||| |||| | || || ||| | || ||||| Sbjct 317902 GACCAGGTCGAAATTCACTCCGGCACCGAGTTCGGCGTTACCCTGGGCACCCCAATCGGC 317961 Query 18301 CTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACT------ATTCCGACATGTGCAAG 18354 | | ||| ||||| |||||||| ||| |||| | ||| |||| | | Sbjct 317962 ATGCTCGTGCGCAACCAGGACCAGCGCCCCAAGGACTACGGAAACTCCACCATGGACCTG 318021 Query 18355 GTGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCG 18414 | || || || || || ||||||| || ||| | | ||||| ||| ||||||| Sbjct 318022 TTCCCACGCCCATCGCATGCCGACTGGACATACCTCGAGAAGTATGGCGTCAAGGCCAGC 318081 Query 18415 TCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTC 18474 || ||||| || || || || |||||||| | | || || || || ||| | Sbjct 318082 TCTGGCGGCGGGCGCAGCTCAGCGCGCGAGACTATTGGCAGAGTGGCTGCTGGTGCGATT 318141 Query 18475 GCCGAGAAATGGCTCGGTCTC 18495 || ||||||| ||| | ||| Sbjct 318142 GCGGAGAAATACCTCCGCCTC 318162 Score = 100 bits (110), Expect = 3e-15 Identities = 123/166 (74%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 19038 CGCCAAGAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGC 19097 |||||||| ||||| || ||||| || || ||||| | ||||| || ||| Sbjct 318379 CGCCAAGAT---AGCATTGGTGGCACCGTCACCTGCGTCATCAGGAACGTCCCCAGTGGC 318435 Query 19098 CTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATC 19157 || || ||||| |||||||||||||| || ||| |||||||||||||||||| ||| Sbjct 318436 CTAGGGGAGCCCTGCTTTGACAAGATGGAAGCCATGCTCGCCCACGCCATGCTCAGCATC 318495 Query 19158 CCGGCCACCAAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 || || |||||||| || ||| | ||| ||| || |||| |||| Sbjct 318496 CCCGCAACCAAGGGCTTTGAGGTCGGCTCCGGCTTCGGCGGCTGCG 318541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107090043254883