Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq427 156 4e-33 seq450 107 2e-18 >seq427 Length=360985 Score = 156 bits (172), Expect = 4e-33 Identities = 1050/1671 (63%), Gaps = 50/1671 (3%) Strand=Plus/Minus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGC--GGTATTGTTGCAATATTTT 138415 |||||||| |||||||| ||||| | |||||| || || | | || |||| Sbjct 267159 ATCTCCCAGACGGTCTT--ATAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTTT 267102 Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACT 138475 | ||| || | | || |||||||| || |||||| || ||||| || | Sbjct 267101 GGATGGAGCCTCCGTCGGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGACCCATAT 267042 Query 138476 TGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535 || |||||| || | || | ||| | || || || || || |||| || |||| Sbjct 267041 CGACCAAGTCCTTGAGCAACCAGGGGTTAACAACTTGGAACTCGCCAGCCAGGACACGAC 266982 Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595 | ||||||||| |||| | ||||| || | |||||| || |||||||| | | Sbjct 266981 GCGAGTAAATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGG 266922 Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655 ||| || || |||||| || || | ||||| || || | |||||| ||||||| Sbjct 266921 TGGAGGCAGTGGGCATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCT 266862 Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715 | ||||||| || ||||||||||| ||| |||| | | |||||| ||||| | Sbjct 266861 GGGCCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGGGTAACGCCCCACATGTCGTATT 266802 Query 138716 GTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCG 138775 | | | ||| | | ||| || ||||||| ||||| ||| || | Sbjct 266801 GGAGCTCGCCCTTGGATACTGGAGATCCCTCGTACGTCTCGTACGTGCCATGGATCTGGG 266742 Query 138776 CCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGA 138835 ||| ||| | || | ||||| | |||||| || || ||||| |||| Sbjct 266741 CCAGCTCTACGGAAGCAGTCAAAGCACCGTGGTAAATGGTCTCAAAGATCTGGGAGTTGA 266682 Query 138836 GCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCC 138895 | || |||||||| ||| | || | |||||| | ||| || || || || | Sbjct 266681 GGAACTTGGCCTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAAGAATGCATCAGCAAGGC 266622 Query 138896 CTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTG-CGGCTTCGATA 138954 | || || || || | || || | ||||| | | ||| || || | |||||| Sbjct 266621 CCTGGACACCAACAGCAACGGGCCTGTGGCGGA-AGTTGCTGCGCCTGGCCTCTTCGACG 266563 Query 138955 GGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGC 139014 || || ||||| ||||| ||||| ||||| || || || || |||| || | | Sbjct 266562 GGGTAGTAGTTGACATCAATGATCTTGTTCAAGTTCTTGACAACAACCTGTGTGACCT-C 266504 Query 139015 TTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTT 139073 | || | | | || ||||||||||| || | | | || ||| | ||| Sbjct 266503 GTGAAGCTTCTGGAAGTCGTATGTGCC---------GTTGGCCATATCAACATAC--GTT 266455 Query 139074 GACACA--AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACA 139131 | || || || || | ||| ||||| || || || || || | ||| |||||| Sbjct 266454 GGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACA 266395 Query 139132 ATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGG 139191 || || | || | || | || ||||| | || | || ||||| || ||| Sbjct 266394 ATCTCTGTGCAAAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGG 266335 Query 139192 TTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATG 139251 || |||||||| ||||| ||||| | || | || || || ||| | ||| | |||| Sbjct 266334 TTGCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATG 266275 Query 139252 AATTTGAACAAGTCCCTAG--CTTGTAT----TTGACGCACGTAAAGTTCGTCGCGCTCG 139305 | | | ||| || | |||| || ||| | | | | | || | |||| Sbjct 266274 GAGTACCA-AAGCTTCTGGGCCTTG-ATGGTCTTGCGACCCTT----TCCATCCCTCTCG 266221 Query 139306 TACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTG 139365 || | ||||| || | || || || ||||| |||||| | | | |||| | Sbjct 266220 TAGCTCTCGTAAAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCG 266161 Query 139366 TCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGA 139425 | || |||||||| | ||| | |||||| || || ||| ||||||| |||||||| Sbjct 266160 TTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGG 266101 Query 139426 ATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC 139485 ||||| | |||| | | ||| || || || || ||| || ||| | || Sbjct 266100 ATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTC 266041 Query 139486 ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCT 139545 | || ||||| ||||| || || ||||||||||| || | |||||||| | || || Sbjct 266040 AAGTCTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCA 265981 Query 139546 TTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATC 139602 || ||| |||||||| || |||| || | ||| || ||||| ||||| | ||| Sbjct 265980 GGGCGCTTGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATG 265921 Query 139603 GGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGG 139659 || | | ||| ||| |||||||||| | | |||| | || || || ||| Sbjct 265920 GGAACGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTG---GCACGG 265864 Query 139660 ACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCG 139718 | ||| | || | ||||| || ||| | || || || | | || || | Sbjct 265863 ATACGATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTG 265804 Query 139719 TAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGA 139778 | ||| || || ||||| || ||||| |||| ||| ||||| ||||| ||||| Sbjct 265803 -AGTGTGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGA 265745 Query 139779 AAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTT 139837 || || | || || ||||| || || || || ||||| ||||| |||| Sbjct 265744 CAGCTGAGCCTGTGGTGTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTT 265685 Query 139838 GTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGA 139897 | ||||| | | ||| || ||||| | || |||||||| ||||| || || | Sbjct 265684 G-GAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCA 265626 Query 139898 CAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCA 139957 | | || ||||| | ||| || || || || || ||| || || | | Sbjct 265625 CCGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTTTCCATCAAGACGGAGAA 265566 Query 139958 GATAACCGTTCTCT--AGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 |||| || ||||| || |||||| |||||||||| ||||||||||| Sbjct 265565 GATA--CGATCTCTCCAGTGTCTTGAAGCCAAAGTATTGGTAGTTGAAATC 265517 >seq450 Length=136939 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || || || || || ||||||||||| || ||| | || Sbjct 111088 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTCGAGGTGGAATCATCC 111147 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| |||||||| || || || ||||| || || Sbjct 111148 GATACTATCGACAATGTTAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 111207 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || || ||| |||||||| | | | |||| || || ||| Sbjct 111208 CAGCGCCTGATTTTCGCAGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCGGACTACAAC 111267 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| ||||| || || || || ||||| Sbjct 111268 ATTCAGAAGGAGTCCACTCTGCATTTGGT 111296 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || || || || | || || || | || Sbjct 110860 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 110919 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || ||||| || || Sbjct 110920 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 110979 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || || ||||| ||||| | | | || ||||| ||| Sbjct 110980 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACTCTCTCCGATTACAAC 111039 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| ||||| ||||| || |||||||| Sbjct 111040 ATTCAGAAGGAGTCGACTCTTCACTTGGT 111068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894231391720