Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq529 125 1e-22 seq444 116 6e-20 seq427 98.7 2e-14 >seq529 Length=148573 Score = 125 bits (138), Expect = 1e-22 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || ||||| |||||| |||||| ||||| ||||| || | || ||||| |||||| Sbjct 106600 TAGTCGCCGACGCGCTTCTCGAAGAAGTTAGTCTTACCGGCCAGGGAGATGTTCTCCATG 106659 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| |||||||||| |||| ||||||| ||||| || |||||| | | Sbjct 106660 AAGTCGAATGGGTTGGCCGATTTGTAGAACTTCTCGTTGCCGAGAGAAAGAAGCAGCCTG 106719 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 ||||||||||| |||||||| || ||| | | |||||||||||||| ||||| | Sbjct 106720 TCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACAG 106779 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139 || || | |||| | | ||||||| ||| || || |||||| | |||| Sbjct 106780 GGAAGTGCCTCGGTCAGGAACTCTTGCTCAATGCTAACAGCCTCGGTAATGA 106831 >seq444 Length=577972 Score = 116 bits (128), Expect = 6e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||| |||||| | ||||||||| | ||||| ||| ||||||||||||||||||||| Sbjct 77269 AGGTAGACCAAGAGATGCTCTTTGAGATCATCCTGGCCTCCAACTACCTCGACATCAAGC 77210 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 |||| ||||| | || |||||||| ||||| || | |||||||| ||| || |||| Sbjct 77209 CCCTGCTCGACGTCGGCTGCAAGACGGTGGCGAATATGATCAAGGGGAAGAGCCCGGAGG 77150 Query 2035732 ACATCCGCAAGACCTTTAACAT 2035753 | || | ||||| ||||| || Sbjct 77149 AGATTAGGAAGACGTTTAATAT 77128 >seq427 Length=360985 Score = 98.7 bits (108), Expect = 2e-14 Identities = 176/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| || || | || |||| ||| ||||||||||||||||| || | || || || Sbjct 265962 TGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGAG 265903 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | |||||||| || || | ||| || || | ||| || | || | || ||| Sbjct 265902 TTTCCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCG 265843 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || ||||| | ||| ||||| | || || | || || || || ||||| ||||| Sbjct 265842 ATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCA 265783 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||| |||||||||| | || ||||| ||||| || | | | || ||| Sbjct 265782 ATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGTGTACCG 265723 Query 2073781 GCATTGAAGAGCGTGGG 2073797 ||||||||||| || || Sbjct 265722 GCATTGAAGAGTGTTGG 265706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916182681637961