Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq427 145 7e-30 seq529 122 8e-23 seq450 116 4e-21 seq482 114 1e-20 seq534 96.9 3e-15 >seq427 Length=360985 Score = 145 bits (160), Expect = 7e-30 Identities = 1093/1741 (63%), Gaps = 63/1741 (4%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109 |||||| ||| |||||||| || ||||||||||| ||||| | | || || |||| Sbjct 267222 GACTGGGACTGATCAATGAAGGCTCCACGGTCAGCAGCCATCTGGACGATGGTGCGCTGG 267163 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 ||||||||| | ||||| || || |||||| | | || ||| | |||| Sbjct 267162 GAG---ATCTCCCAGACGGTCTTATAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATG 267106 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 || | ||||| | || || | || | || ||| | ||| | | || Sbjct 267105 TTTTGGATGGAGCCTCCGTCGGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGACCC 267046 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 | |||| || ||| | || || | | || || || || |||||||| || || || Sbjct 267045 ATATCGACCAAGTCCTTGAGCAACCAGGGGTTAACAACTTGGAACTCGCCAGCCAGGACA 266986 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || ||| || | ||| || | || || || |||||||| ||| | |||||| Sbjct 266985 CGACGCGAGTAAATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGG 266926 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | ||| | || ||||||||| || || ||||| |||||||| | |||| | | || Sbjct 266925 GAGGTGGAGGCAGTGGGCATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTG 266866 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || | | ||| |||| |||||||||| || | || || ||| |||||||||| Sbjct 266865 ATCTGGGCCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGGGTAACGCCCCACATGTCG 266806 Query 148470 TACTGCAGAATG-CCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGC 148528 || || || | || || || || | | |||||||||| ||||| || || Sbjct 266805 TATTGGAGCTCGCCCTTGGATACTGGAGAT-CCCTCGTACGTCTCGTACGTGCCATGGAT 266747 Query 148529 CGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 | ||||| || | || | || |||| |||||| ||||| || || Sbjct 266746 CTGGGCCAGCTCTACGGAAGCAGTCAAAGCACCGTGGTAAATGGTCTCAAAGATCTGGGA 266687 Query 148589 GTTGAGCAGCGCCGCCGACTCG---CTTTCGTACGGCATACGCAGCCGCACAAACGCGTC 148645 |||||| | | || |||| ||| | || | || || || || || || Sbjct 266686 GTTGAGGAACTTGGC---CTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAAGAATGCATC 266630 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 ||||||||||| || || || ||| ||||| ||| | |||| | | | || || Sbjct 266629 AGCAAGGCCCTGGACACCAACAGCAACGGGCCTGTGGCGGAAGTTGCTGCGCCTGGC-CT 266571 Query 148706 C-TCGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTT 148763 | |||| || |||| |||| || ||||||||| ||||| || || || |||| | Sbjct 266570 CTTCGACGGGGTAGTAGTTGACATCAATGATCTTGTTCAAG-TTCTTGACAACAACCTGT 266512 Query 148764 GTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGAT----GCATCGGTT--C 148817 || | | | ||| | || ||||| || | | | || ||| ||| | Sbjct 266511 GTGACCTCGTGAAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATATCAACATACGTTGGC 266452 Query 148818 ACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATC 148877 | ||| | || || | || |||||||| |||||| || || |||||| || ||| Sbjct 266451 AGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAATC 266392 Query 148878 TCGGCGCACAGATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTG 148934 || | ||| || || ||||| || | || | |||||| || |||||||||| | Sbjct 266391 TCTGTGCAAAGGTTGGAGCTGCGAATGGT---ACCGAGGTTCTTCTGGTTGCTCTTGCGG 266335 Query 148935 TTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT- 148993 ||||| || ||||||||||||||| | || || || || || | || | || Sbjct 266334 TTGCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATG 266275 Query 148994 --GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCC------TCCTGC 149045 | ||| | || | ||| || |||| || || | ||||||| ||| | Sbjct 266274 GAGTACCAA---AGCTTCTGGGC-----CTTGATGGTC-TTGCGACCCTTTCCATCCCTC 266224 Query 149046 TCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCAC 149105 ||||| || ||| ||| ||| | |||||||| || | | || |||||| Sbjct 266223 TCGTAGCTCTCGTAAAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCAC 266164 Query 149106 TTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCG 149165 | || ||||||||||| | ||| | |||| | | || |||||||| || ||||| Sbjct 266163 TCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCC 266104 Query 149166 GGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGG 149225 || | |||||| ||||| | | ||| || || | || || ||| ||| Sbjct 266103 GGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTT 266044 Query 149226 CGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCG 149285 | || || || | || | ||||||||||| ||||| | ||| | |||| || Sbjct 266043 CTCAAGTCTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCA 265984 Query 149286 CCCTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACC 149342 || |||| ||||| || ||||| |||| | | ||||||| || || || | | Sbjct 265983 CCAGGGCGCTTGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGC 265924 Query 149343 ATAGGTTCAATGCCACTGGCAGTGCCGTTAGTA-GAGCTA---ATGCGACTGCCGCGCGC 149398 || || | || ||| | | | ||||| ||| ||| | |||| || | | | || Sbjct 265923 ATGGGAACGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGC-AC--CAGTG-GC 265868 Query 149399 TCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTC 149458 || | || | ||| | ||||| || ||| || ||||||||| || ||| Sbjct 265867 ACGGATACGATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGT 265808 Query 149459 GCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGA 149518 ||| || ||||| ||||| || ||||| ||||||| | || ||||| || Sbjct 265807 CTTGAGTGTGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGA 265748 Query 149519 GCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATA 149578 ||| || | | || ||||| ||| | || ||| |||||||| || || Sbjct 265747 CGACAGCTGAGCCTGTGGTGTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTA 265688 Query 149579 TTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCC 149638 ||| ||| | | ||| | ||||| || || || ||||| || ||||| Sbjct 265687 TTTGGAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATGCC 265628 Query 149639 TATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAG 149698 | || || ||||| | ||| |||||||| | ||| || || || ||| ||| Sbjct 265627 CACCGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTTTCCATCAAGACGGAG 265568 Query 149699 CAAGTAGCCGTTTTCT--AGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCG 149756 ||| | || | ||| ||||||||| |||||||||| | ||||| || || ||| || Sbjct 265567 -AAG-ATACGATCTCTCCAGTGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCG 265510 Query 149757 T 149757 | Sbjct 265509 T 265509 >seq529 Length=148573 Score = 122 bits (134), Expect = 8e-23 Identities = 332/503 (66%), Gaps = 13/503 (3%) Strand=Plus/Plus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||| ||||||||||| ||||| || ||||| || || || ||| || ||||| | ||| Sbjct 106599 GTAGTCGCCGACGCGCTTCTCGAAGAAGTTAGTCTTACCGGCCAGGGAGATGTTCTCCAT 106658 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473 || ||||| |||||| || || || | ||| | ||| | | ||||| | Sbjct 106659 GAAGTCGAATGGGTTGGCCGATTTGTAGAACTTCTCGTTGCCGAGAGAAAGAAGCAGCCT 106718 Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCAC 120533 ||| || || ||||||||||| | ||| | | ||||||||||| |||| ||| || Sbjct 106719 GTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGC-AC 106777 Query 120534 CGGCAAC-GCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGA 120592 || || ||| || | ||||| | ||||||| || ||||| | | | | | Sbjct 106778 AGGGAAGTGCCTCGGTCAGGAACTCTTGCTCAATGCTAACAGCCTCGGTAATGACGTCTT 106837 Query 120593 GCATAGTGTG---GCC-GGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCA 120648 | | | || || |||| ||||| | | | | | || ||||| || Sbjct 106838 GGACGGCCTGCTTGCTTGGGCG----GTGTTTAAGGTGAGA---GAAGAGGAGGCAGGCG 106890 Query 120649 AAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGC 120708 ||||| ||||| || ||||||||||| || || |||||||| || || ||||| | | Sbjct 106891 AAGTCAGTGTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGGCCAGCC 106950 Query 120709 ATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCC 120768 |||| ||| | |||| | |||| |||| || ||| ||| || ||||| | ||| Sbjct 106951 ATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAAATACCC 107010 Query 120769 TCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCAC 120828 || ||| || ||||| || | |||| ||| || || | |||| | ||||||| Sbjct 107011 TCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAGGTAGAATCCTTGTCTTGGATCCAC 107070 Query 120829 TTCATGGCCCACTCGGCCTTTTT 120851 | | ||||| |||||||| || Sbjct 107071 CTGACAGCCCAATCGGCCTTCTT 107093 >seq450 Length=136939 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||||||| | ||| |||||| |||||||| || Sbjct 111056 GTCGACTCCTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCCTCAAGCTGCTTACCA 110997 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || ||||||||||| ||||| ||||| |||||||| ||||| |||| Sbjct 110996 GCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTG 110937 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| | ||| || || | |||| ||| ||||| || || || Sbjct 110936 ACGTTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTC 110877 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 110876 TTAACGAAGATCTGCAT 110860 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | |||||||| ||||| || ||||| || || ||| | | | ||||| | Sbjct 111293 AAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGGCCA-TCCTCCAA 111235 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| |||| || ||||||||||| ||||| || || |||||||| || Sbjct 111234 CTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGAAT 111175 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | || |||| | ||||| |||| || | || ||||| Sbjct 111174 CTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTGCC 111115 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || ||||||||||| Sbjct 111114 CGTAAGAGTCTTGACAAAAATCTGCAT 111088 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||||| |||||||| ||||| || |||||||| || || | | | ||||| |||| Sbjct 111519 ATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAGACAGAGTACGGCCA-TCCTCTAGCT 111461 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||||||||| |||| || ||||||||||| || |||||||| ||||| || ||||| Sbjct 111460 GCTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCT 111401 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | || || | | ||| || || | || | || || |||| Sbjct 111400 TAGACTTGACGTTATCGATGGTATCCGACGACTCGACCTCCAACGTAATTGTCTTTCCGG 111341 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || ||||| || ||||| Sbjct 111340 TGAGAGTCTTGACGAAGATTTGCAT 111316 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | |||| ||| ||||| || ||||| |||| || ||| |||||||| Sbjct 111749 AAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTTCCATCCTCGAGT 111690 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || || ||||||||||| || ||||| || ||||| || ||| Sbjct 111689 TGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATC 111630 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| ||||| | | ||| || |||| || | || || || Sbjct 111629 TTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATAGTCTTTCCC 111570 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||||||||| Sbjct 111569 GTCAGGGTCTTGACGAAAATCTGCAT 111544 >seq482 Length=177890 Score = 114 bits (126), Expect = 1e-20 Identities = 148/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| || | ||| | | | ||||||||||||||||| Sbjct 107131 GTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 107073 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || || || || |||||||| |||||| ||| Sbjct 107072 GGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTT 107013 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | |||||| || | ||||| || ||||| ||||| || Sbjct 107012 GACATTGTCGATAGTGTCGGATGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGT 106953 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || ||||| || |||||| || Sbjct 106952 CTTCACGAAGATTTGCATGACT 106931 >seq534 Length=453533 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| || | || || ||||||||||| ||||| || || |||||| Sbjct 392677 TCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTG 392736 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | || |||| || ||| || || | ||||| | Sbjct 392737 TCTTGGATCTTCGACTTGACATTGTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATG 392796 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| |||| || || ||||| Sbjct 392797 GTCTTGCCCGTCAAGGTCTTGACGAA 392822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417180386760