Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq450 131 2e-25 seq482 116 3e-21 seq534 96.9 3e-15 >seq450 Length=136939 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | || |||||| ||||||||||| || | | Sbjct 111314 CCACCACGAAGACGGAGAACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGAC 111255 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || | || |||| |||||| || || || |||| ||||||||||||| |||| Sbjct 111254 AAGGTGCGGCCATCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 111195 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| ||||| ||| | | | | | || ||| ||||||||| Sbjct 111194 ATACCCTCCTTGTCTTGAATCTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCACC 111135 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||| ||||| || ||||| | ||| || ||||| |||||||| Sbjct 111134 TCGAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 111088 Score = 125 bits (138), Expect = 6e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||||| | || || |||| || ||||||||||| || || Sbjct 111051 CTCCTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAA 110992 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| ||||| || |||||||||| ||||| ||| | || Sbjct 110991 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGT 110933 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| ||| || ||||||| ||||| || || || || | || || | Sbjct 110932 TGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTAA 110873 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 110872 CGAAGATCTGCAT 110860 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 35533 ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTG 35592 |||||| || |||||| |||||||||||||| | || || || | || || ||||| Sbjct 111519 ATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAGACAGAGTACGGCCATCCTCTAGCTG 111460 Query 35593 CTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 ||| |||||||| || | ||||||||||||| || | || |||||| || |||||| Sbjct 111459 CTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTT 111400 Query 35653 TTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 ||| | | | | || || ||| || ||||||| ||| || || || || || Sbjct 111399 AGACTTGACGTTATCGATGGTATCCGACGACTCGACCTCCAACGTAATTGTCTTTCCGGT 111340 Query 35713 CAAAGTTTTCACAAATATCTGCAT 35736 | ||| || || || || ||||| Sbjct 111339 GAGAGTCTTGACGAAGATTTGCAT 111316 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || |||||||| || |||||||| ||| | Sbjct 111770 CCACCACGAAGACGGAGCACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 111711 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || | | || || || |||||||| ||||| |||| ||||||||||||| || Sbjct 111710 AGCGTCCTTCCATCCTCGAGTTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGG 111651 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||| ||| ||||| ||| | |||| | | ||||| || || || Sbjct 111650 ATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGAAGACTCAAC 111592 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || || || || ||||||| || || || || |||||||| Sbjct 111591 CTCGAGAGTAATAGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 111544 >seq482 Length=177890 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | |||| ||||| || | || |||||| || |||||||| || | Sbjct 107161 CCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 107102 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || ||||| ||||||||||||| ||| Sbjct 107101 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGA 107042 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | |||||| || |||||| Sbjct 107041 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCCACC 106982 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||||| || ||||| || || ||||| Sbjct 106981 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 106935 >seq534 Length=453533 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| |||| | ||| || | || || |||||||| || ||||| | Sbjct 392642 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 392701 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||||||||||| ||||| | ||||||||| |||||| ||| | | | Sbjct 392702 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 392761 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | || ||| || || ||||| | ||||| || || |||||||| || || || | Sbjct 392762 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 392821 Query 35727 A 35727 | Sbjct 392822 A 392822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450790224682920