Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq427 244 1e-59 seq529 100 4e-16 >seq427 Length=360985 Score = 244 bits (270), Expect = 1e-59 Identities = 1157/1812 (64%), Gaps = 47/1812 (3%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGA 110421 ||||| |||||||| ||||||||||| || | ||||| || || | ||||| || | Sbjct 267321 CGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCA-GCCAGCAAAGTGCATGGATGT 267263 Query 110422 GAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATA--CTTTGACTTTGGTCAATG 110479 || |||| ||| ||||| | |||| || ||| | | || |||| | |||||| Sbjct 267262 GATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGAGACTGGGACT--GATCAATG 267205 Query 110480 AAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCA-TCTTA-ATTTCCCAAACTG 110537 ||| || || | || ||||| | | || | | | | | || ||||| || | Sbjct 267204 AAGGCTCCACGGTCAGCAGCCATCTGGACGA--TGGTGCGCTGGGAGATCTCCCAGACGG 267147 Query 110538 TGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCG 110597 | |||||| |||||| || | ||||| | | ||| || |||||||| || || Sbjct 267146 TCTTATAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTTTGGATGGAGCCTCCGT 267087 Query 110598 CCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGA 110657 | | ||| | | |||||| | | ||||| ||||| || | | ||| |||| Sbjct 267086 CGGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGACCCATATCGACCAAGTCCTTGA 267027 Query 110658 ----CGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATG 110713 | ||| | || |||| ||||| || || ||| | | | ||| ||| Sbjct 267026 GCAACCAGGGG----TTAACAACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAAATG 266971 Query 110714 TTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTT 110773 || | |||||||| || ||||| || || || | || || | ||||||||| || Sbjct 266970 TTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAGGCAGTG 266911 Query 110774 GGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGA 110833 ||||| ||||| | | ||| ||| || | ||| | || |||||| | |||||||| Sbjct 266910 GGCATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGA 266851 Query 110834 ACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCC 110892 |||||||| | | | | || | || |||||||||| | || ||| | || Sbjct 266850 GAGTCCCAGTCCCACAGGTCGGTAGGGGTAACGC-CCCACATGTCGTATTGGAGCTCGCC 266792 Query 110893 TTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACA 110952 | ||| | ||||| ||||| | || || || | || ||| | |||| || Sbjct 266791 CTTGGATACTGGAGATCCCTCGTACGTCTCGTACGTGCCATGGATCTGGGCCAGCTCTAC 266732 Query 110953 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 111012 | || || | |||| || ||||| |||||||| | | || | |||||| Sbjct 266731 GGAAGCAGTCAAAGCACCGTGGTAAATGGTCTCAAAGATCTGGGAGTTGAGGAACTTGGC 266672 Query 111013 TTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 111072 || ||||| || | |||| | ||| |||| || || || || ||||| Sbjct 266671 CTCGGGAGAATCGAAGGGAAGGCGGAGAGCCAAGAATGCATCAGCAAGGCCCTGGACACC 266612 Query 111073 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAA 111129 | | ||| || ||||| || | || | ||| | ||| ||||| || | Sbjct 266611 AACAGCAACGGGCCTGTGGCGGAAGTTGC---TGCGCCTGGCCTCTTCGACGGGGTAGTA 266555 Query 111130 ATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTT 111189 || ||||||| ||| | || ||| ||||| || ||||| || ||||| || Sbjct 266554 GTTGACATCAATGATCTTGTTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGAAGCTT 266495 Query 111190 TTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAA 111249 | | || | |||| | | || |||||| |||| ||||| | |||||||| Sbjct 266494 CTGGAAGTCGTATGTGCCGTTGGCCATATCAACATACGTTGGCAGGGCAAGGGATGCCAA 266435 Query 111250 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGA 111309 || || || || |||||| | | | |||||| | ||| ||||| || | |||||| Sbjct 266434 GTTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAATCTCTGTGCAAAGGTTGGA 266375 Query 111310 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369 || ||| || || | ||||| ||||| ||||| |||||| ||||||||||| || Sbjct 266374 GCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTACAG 266315 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGG 111428 |||| | || | || ||||| || || | | |||||| | | ||||| | || | | Sbjct 266314 CATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGAGTACCAAAGCTTCTGGGC 266255 Query 111429 CTGGTACAATGGCGTTG---GCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 111485 || | |||| ||| || ||| ||| |||||| | ||| || || |||| Sbjct 266254 CTTG----ATGGTCTTGCGACCCTTTCCATCCCTCTCGTAGCTCTCGTAAAGCGCCTCAA 266199 Query 111486 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATT 111545 |||| || || |||| | | || || || || || || | || | ||| | Sbjct 266198 ACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGT 266139 Query 111546 GACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 111605 ||| | |||||| ||||||||||| || || || ||||| || | | || | | Sbjct 266138 CACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAGT 266079 Query 111606 CTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 111664 | | ||| || | || || | || ||||| || || || |||||||| | || | Sbjct 266078 CACGGGCACGGA-CTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCTAGGAACTCAAAGACA 266020 Query 111665 TCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTG 111720 ||||||||||||||||| | |||| |||| || || | | | | ||| |||| Sbjct 266019 TCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTG-CCACCTTG 265961 Query 111721 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 111780 | || || | || ||| ||| || ||||| ||||| |||| ||||||| || | Sbjct 265960 GTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGAGTT 265901 Query 111781 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAAT 111840 || || || || || | | |||| | | | |||||||| || || || Sbjct 265900 TCCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCGAT 265841 Query 111841 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 111900 ||| || || ||||||||| ||||| | | || || |||||||||| | || Sbjct 265840 ACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCAAT 265781 Query 111901 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 111960 ||||||||| || ||| | |||||| |||| ||| | ||||||||| || Sbjct 265780 ACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGTGTACCGGC 265721 Query 111961 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTATGTC 112018 ||||||||| ||||| | ||||| |||| || |||| ||||| || ||||||| Sbjct 265720 ATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTATGTC 265663 Query 112019 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTAC 112078 || | ||||| || || ||||| ||||| | || || ||||| | ||||| | Sbjct 265662 TCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCATGTGC 265603 Query 112079 TGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTT 112137 || || | || | | ||||| || || ||||||| | || |||| || || || Sbjct 265602 TGCGGCCTCTCAGCAACCTTTCCATCAAGACGGAGAAGATACGATC-TCTCCAGTGTCTT 265544 Query 112138 GAGACCAAAGTA 112149 || |||||||| Sbjct 265543 GAAGCCAAAGTA 265532 >seq529 Length=148573 Score = 100 bits (110), Expect = 4e-16 Identities = 331/509 (65%), Gaps = 7/509 (1%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || |||||||| || || || |||||| || || | |||||| || Sbjct 106899 GTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGGCCAGCCATGAGGCC 106958 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| |||| | ||| || || |||||||| |||||||| || Sbjct 106959 ACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAAATACCCTCAACGGC 107018 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGC 122849 || || |||| || || | |||||||| | ||| | | | ||| | | || Sbjct 107019 AGCGAAGGCAACGAGACGCTGGGCGAAGGTAGAATCCTTGTCTTGGATCCACCTGACAGC 107078 Query 122850 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTT 122909 ||| | |||||||||| || || || | || | |||||| | || | | | Sbjct 107079 CCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGCG 107138 Query 122910 TTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT 122969 || || | ||||| |||||| ||||||| | || ||||| ||| | |||| | Sbjct 107139 TTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAGGGAGTATGTCTCGGCGTGAATGTT 107198 Query 122970 TTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCG 123028 || || || ||| | ||||||| |||| ||||| || || ||||| | | Sbjct 107199 CTCGATCAT-AATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCTG 107256 Query 123029 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 123087 | || | | || ||||| |||||||| || ||| | || ||||| || || Sbjct 107257 CTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCCGACGCGGCGAAGAAAGCGAGA 107316 Query 123088 ATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATCT 123144 | || ||||| | |||| || || | || | |||||||||| || || Sbjct 107317 ACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGGCGGTTGTTCCAGTCGTGGAGGTCC 107376 Query 123145 TTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||||| | ||||| || || || ||||| Sbjct 107377 TTGGAGAGATCAATCTCCTCTGCTGTCCA 107405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027297610400