Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq427 257 2e-63 seq529 123 3e-23 >seq427 Length=360985 Score = 257 bits (284), Expect = 2e-63 Identities = 950/1464 (65%), Gaps = 41/1464 (3%) Strand=Plus/Plus Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGTGTC-TTGA 104213 || ||||| |||| || || |||| || | ||||||| || || ||||| ||| Sbjct 265532 TACTTTGGCTTCAAGACACTGGAGA-GATCGTATCTTCTCCGTCTTGATGGAAAGGTTGC 265590 Query 104214 TGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTG 104273 || | | || ||| ||||| | ||||| || || | || ||||| || || || |||| Sbjct 265591 TG-AGAGGCCGCAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGCGAGGATATTG 265649 Query 104274 ATTCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACC 104331 | | ||||||||| || ||||| |||| || |||| ||||| | || Sbjct 265650 AGAAGACAATCGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCTTCCCC 265707 Query 104332 AACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAA 104391 ||| ||||||||||| ||||||||| | || |||| |||||| | ||| || Sbjct 265708 AACACTCTTCAATGCCGGTACACCACAGGCTCAGCTGTCGTCCTGCTTCTTGGTCGACAT 265767 Query 104392 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAA 104451 ||||||||| || | |||||||||| || || | | ||||| |||||||| Sbjct 265768 GAAGGAGGACAGTATTGAGGGTATCTATGACACACTCAAGACCTGTGCCATGATCTCAAA 265827 Query 104452 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCG 104511 | || || ||||| || || |||||||| | | | |||| | | || Sbjct 265828 GACCGCCGGAGGTATCGGATTGAACATCCATCGTATCCGTGCCACTGGTGCATACATCGC 265887 Query 104512 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 104571 || || || || | || ||||||| |||| ||||| ||||| || ||| ||| || Sbjct 265888 TGGTACCAACGGAAACTCGAATGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGC 265947 Query 104572 GCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGC 104627 | || || | |||| ||| | | | | || || |||| |||| | |||| Sbjct 265948 AAGATACGTTGACCAAGGTGG-CAACAAGCGCCCTGGTGCTTTCGCCATCTACGTCGAGC 266006 Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687 |||||||||||||| || | |||||||| || ||| | ||||| || | ||||| | Sbjct 266007 CATGGCACGCGGATGTCTTTGAGTTCCTAGACTTGAGAAAGAACCACGGCAAGGAGGAAG 266066 Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747 || ||| || | |||| |||||||||||| || ||||||||||||||| | |||| Sbjct 266067 TCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTG 266126 Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807 || ||| || | ||| | ||| | || || || || ||||| | | || | Sbjct 266127 AGAAGAACGGTGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGGTTGGCTGACGTTT 266186 Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAG------GAAGAAGGTCGGGCGA 104861 || || |||||||| || |||||| | |||||| | | | ||||| || Sbjct 266187 ACGGCGATGAGTTTGAGGCGCTTTACGAGAGCTACGAGAGGGATGGAAAGGGTCGCAAGA 266246 Query 104862 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921 | | || |||| || | ||| | | |||||| || ||||||| ||||| | Sbjct 266247 CCATCAAGG-CCCAGAAGC-----TTTGGTACTCCATTCTCGAGGCTCAAACTGAGACAG 266300 Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981 | | || | |||||| ||||| || || || |||| ||||| || || ||||| | | Sbjct 266301 GAAACCCTTTCATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCG 266360 Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 105041 || || || ||||| || || ||||| || | || | | | |||||| Sbjct 266361 GTACCATTCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCTCCTGATGAGG 266420 Query 105042 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG- 105100 || ||||||||| | ||||| | || || || | |||||| ||| | | ||| | Sbjct 266421 TTGCCGTGTGTAACTTGGCATCCCTTGCCCTGCCAACGTATGTTGAT--ATGGCCAACGG 266478 Query 105101 -ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAG 105159 |||| || | | || || ||||| || || | ||| ||| ||| | |||| Sbjct 266479 CACATACGACTTCCAGAAGCTTCACGAGGTCACACAGGTTGTTGTCAAGAACTTGAACAA 266538 Query 105160 AGTTATTGATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACC 105218 | |||||| || | |||||||| | ||| | | | | || | | ||| Sbjct 266539 GATCATTGATGTCAACTACTACCCCGTCGAAGAGGCCAGGCGCAGC-AACTTCCGCCACA 266597 Query 105219 GTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCAT 105278 | || ||| | | ||||| ||||| || || |||| |||| | | |||| | | Sbjct 266598 GGCCCGTTGCTGTTGGTGTCCAGGGCCTTGCTGATGCATTCTTGGCTCTCCGCCTTCCCT 266657 Query 105279 TTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCG 105338 | ||||| ||| || ||| |||| | | || ||||||||||| || |||| | Sbjct 266658 TCGATTCTCCCGAGGCCAAGTTCCTCAACTCCCAGATCTTTGAGACCATTTACCACGGTG 266717 Query 105339 CTCTTGAGGCGAGTTC---AGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395 || |||| | ||| |||| |||| || | |||| | || || || | |||| Sbjct 266718 CT-TTGA--CTGCTTCCGTAGAGCTGGCCCAGATCCATGGCACGTACGAGACGTACGAGG 266774 Query 105396 GTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-T 105453 | ||||||| || |||||| | ||| |||| || ||||||| || | || | | Sbjct 266775 GATCTCCAGTATC-CAAGGGCGAGCTCCAATACGACATGTGGG-GCGTTACCCCTACCGA 266832 Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513 | | |||||||| ||||||||| | |||||| || | ||| | || ||| ||| Sbjct 266833 CCTGTGGGACTGGGACTCTCTCAAGGCCCAGATCAAGCAGCACGGTGTCCGCAACTCTCT 266892 Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573 ||| | || || ||||| || ||||||||| | || || | || || || ||||| Sbjct 266893 GCTCGTTGCACCCATGCCCACTGCCTCCACCTCCCAGATTCTCGGCTTCAACGAGTGCTT 266952 Query 105574 TGAACCCTACACGACGAACATCTA 105597 || || ||||| ||||||| || Sbjct 266953 CGAGCCATACACCTCGAACATTTA 266976 >seq529 Length=148573 Score = 123 bits (136), Expect = 3e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | |||||| | || |||| || || | ||||| || ||||||||| | | | Sbjct 107129 CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCCGATTGGGCTGTCAGG 107070 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | |||| | | | |||| || |||| ||| | || || || ||||| Sbjct 107069 TGGATCCAAGACAAGGATTC-TACCTTCGCCCAGCGTCTCGTTGCCTTCGCTGCCGTTGA 107011 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 |||||| ||||||||||| |||||| | |||| ||||| |||||||| || ||||| Sbjct 107010 GGGTATTTTCTTCTCTGGCTCCTTCGCATCCATTTTCTGGCTTAAGAAGCGTGGCCTCAT 106951 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 | | || || |||||| |||||||| || || || |||||||| |||||| Sbjct 106950 GGCTGGCCTTACCTTCTCTAACGAGCTCATTTCCCGCGACGAGGGTCTCCAC 106899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256432834760