Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq427 228 9e-55 seq529 118 1e-21 >seq427 Length=360985 Score = 228 bits (252), Expect = 9e-55 Identities = 482/710 (68%), Gaps = 18/710 (3%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAG--CCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCA 53300 ||||| ||| || | ||| ||||| ||||| || ||||| | ||||| || |||| Sbjct 265661 GAGACATACAACCTCATGTCTTCCAAA--TACTTCACACACGCTTCCCCAACACTCTTCA 265718 Query 53301 ACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACT 53360 | || ||||| || ||||| ||||| ||||||| |||| | |||||||| ||| Sbjct 265719 ATGCCGGTACACCACAGGCTCAGCTGTCGTCCTGCTTCTTGGTCGACATGAAGGAGGACA 265778 Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420 || || || ||||| || || |||||| |||||| ||||| ||| | || | Sbjct 265779 GTATTGAGGGTATCTATGACACACTCAAGACCTGTGCCATGATCTCAAAGACCGCCGGAG 265838 Query 53421 GTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAA 53478 ||||||| | || | ||| | ||||||| | || || ||| || || || Sbjct 265839 GTATCGGATTGAACATCCATCGTA--TCCGTGCCACTGGTGCATACATCGCTGGTACCAA 265896 Query 53479 CGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGT 53538 ||| | | |||| ||||| || ||||||||||||||||||||||| || | ||||| Sbjct 265897 CGGAAACTCGAATGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCAAGATACGT 265956 Query 53539 CAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGC 53598 |||| ||||| |||||| || | |||||||||||| ||||||| |||||||| Sbjct 265957 TGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTCGAGCCATGGCACGC 266016 Query 53599 CGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCG 53658 || | | ||||| || || || | ||| || || | || || | || ||| Sbjct 266017 GGATGTCTTTGAGTTCCTAGACTTGAGAAAGAACCACGGCAAGGAGGAAGTCCGTGCCCG 266076 Query 53659 TGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717 |||| |||| ||| ||||| ||||| ||||| ||||||||| | || |||||| ||| Sbjct 266077 TGACTTGTTCTAC-GCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGAAGAACG 266135 Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGG 53777 || ||| ||| |||||||| ||||||||||| || | | || ||||| || | Sbjct 266136 GTGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGGTTGGCTGACGTTTACGGCGATG 266195 Query 53778 AGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG----AAGAAGGTC 53833 ||||| | | | | || || |||| || |||| | | | |||| || Sbjct 266196 AGTTTGAGGCGCTTTACGAGAGCTACG-AG---AGGGATGGAAAGGGTCGCAAGACCATC 266251 Query 53834 AAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTAC 53893 ||||| | || | ||| | | || ||| || || ||||| |||| || | | Sbjct 266252 AAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGGCTCAAACTGAGACAGGAAACCCTTTC 266311 Query 53894 ATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 ||| ||||||||| | |||| |||||||||||||||||| |||| Sbjct 266312 ATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 266361 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 |||||| ||||| || | ||| || |||||||||||||| |||||| |||| || | || Sbjct 267187 TGCTGACCGTGGAGCCTTCATTGATCAGTCCCAGTCTCTCAACATCCACATGAAGGACCC 267246 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 || ||| |||| | | || ||||||||| || |||||| || |||||||| || Sbjct 267247 AACAATGGGCAAGATCACATCCATGCACTTTGCTGGCTGGAAGCTTGGCCTCAAGACCGG 267306 Query 55906 TATGTACTATCTGCGGACC 55924 |||||||| || || ||| Sbjct 267307 CATGTACTACCTCCGTACC 267325 >seq529 Length=148573 Score = 118 bits (130), Expect = 1e-21 Identities = 337/511 (66%), Gaps = 18/511 (4%) Strand=Plus/Plus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || || || || | |||||||| ||| || ||||||||||| | ||| || |||| | Sbjct 106927 TCGTTAGAGAAGGTAAGGCCAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCG 106986 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 ||||| ||| |||||| || || || || || ||||| || || || || ||||| Sbjct 106987 AAGGAGCCAGAGAAGAAAATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAG 107046 Query 74910 GGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGG 74965 | | ||| ||| ||||| | |||||| || || || |||| ||| Sbjct 107047 GTAGAATCCTT-GTCTTGGATCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGG 107105 Query 74966 GACAGTATCGATCGCTTGGAAGAGGCTTG--CCTTCT-CTTCGGGATCCTTGACGAGCTT 75022 | || ||||| || | ||||||| || | || ||| | ||||||| | | Sbjct 107106 AATGGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCTT---GCTCCTTGATGTATGT 107162 Query 75023 GTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTA 75082 |||||| | || ||||| ||||| | ||||| |||| | | ||| | |||| Sbjct 107163 GTCAATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATAATTTGGAAACCGTA 107222 Query 75083 GAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAAAATTCATGTCGATATTCTCC 75140 ||| | || || |||| || || || || | |||| || | || ||||| Sbjct 107223 GAAGCAGCGGGCTTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAG--GAGGTTCTCG 107280 Query 75141 ATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCA 75200 |||| || |||||||| |||||||| ||||| || || ||| |||| ||||||| Sbjct 107281 TTGACAATTCCGTCCGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCA 107340 Query 75201 TCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACC 75257 ||||| ||| | |||| ||| || | |||||| | | |||||||||||| | Sbjct 107341 TCGTCGTTGAGGCGGTTGTTCCAGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCTGCT 107400 Query 75258 GTCCAGAAACTCCCAATCGCCTTTTTGTACA 75288 ||||||||| | |||||| ||||||| Sbjct 107401 GTCCAGAAAGAGGCCTCCGCCTTCTTGTACA 107431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547211902720200