Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20pannorum_20var._20pannorum_20[genbank_20GCA_5F001 630605.1_202016-04-25] 599 sequences; 30,534,672 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq482 152 4e-32 seq450 134 1e-26 seq534 102 6e-17 >seq482 Length=177890 Score = 152 bits (168), Expect = 4e-32 Identities = 168/222 (76%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||| |||| |||||| ||| |||||| ||||||||||| || | || ||| Sbjct 107152 AGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 107093 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || || |||||||| ||||| |||||||| |||||||| || | || | || ||| Sbjct 107092 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATTCCCTCC 107033 Query 44240 TTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCG 44297 || ||| ||||| ||| || ||| | || ||||||| || |||||||| | | Sbjct 107032 TTGTCCTGGATCTTGGACTTGACATTGT--CGATAGTGTCGGATGACTCCACCTCAAGGG 106975 Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 | || ||||| ||||| ||||||||||||||||||||||||| Sbjct 106974 TGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGA 106933 >seq450 Length=136939 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| || ||||||||||||| ||| ||| |||| || Sbjct 111068 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCCTCA 111009 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || |||| |||||||| || | ||| | || ||||| ||| Sbjct 111008 AGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 110949 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| || || ||||||| || || ||||| Sbjct 110948 ATCTTGGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 110889 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||| ||||| Sbjct 110888 CCAGTGAGGGTCTTAACGAAGATCTGCAT 110860 Score = 127 bits (140), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| ||||||||||| ||||||||||| ||| || | | || || Sbjct 111753 CACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTTCCATCCTC 111694 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| || |||||||||| |||||||| || | || | ||| ||||| ||| Sbjct 111693 GAGTTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 111634 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | |||||||| | || || ||||| | ||||| ||||| Sbjct 111633 AATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATAGTCTT 111574 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| |||||||| ||||| || ||||| Sbjct 111573 TCCCGTCAGGGTCTTGACGAAAATCTGCAT 111544 Score = 109 bits (120), Expect = 4e-19 Identities = 154/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 |||| || || ||| |||||| || |||||||| || | | || || || | || || Sbjct 111296 ACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGGC-CATCCTC 111238 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || || || |||| |||||||| || | ||| | ||| ||||| || Sbjct 111237 CAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTG 111178 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | || || |||| ||||||||||| | |||||||||| Sbjct 111177 AATCTTGCTCTTAACATTGT--CGATAGTATCGGATGATTCCACCTCGAGCGTAATCGTC 111120 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || ||||| || || || ||||| Sbjct 111119 TTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 111088 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || ||||||||||| | || || | || || |||||||| || ||||| Sbjct 111507 CTCCTTCTGAATGTTGTAATCAGACAGAGTACGGCCATCCTCTAGCTGCTTGCCCGCAAA 111448 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 || | |||||||| || | || | || ||||| || ||||| ||| | | Sbjct 111447 AATTAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTAGACTTGACGTT 111388 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | ||||| || | || || ||||||| |||||| |||||||| ||||| ||||| || Sbjct 111387 ATCGATGGTATCCGACGACTCGACCTCCAACGTAATTGTCTTTCCGGTGAGAGTCTTGAC 111328 Query 44326 GAAGATTTGCAT 44337 |||||||||||| Sbjct 111327 GAAGATTTGCAT 111316 Score = 95.1 bits (104), Expect = 9e-15 Identities = 134/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| |||||| ||||||||||| |||| ||| ||| |||| || Sbjct 110840 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 110781 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||||| ||| ||||| || | || | || ||||| || Sbjct 110780 AGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGA 110721 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| || ||| | ||||| |||| ||| || ||||| | || || ||||| Sbjct 110720 ATCTTGCTCTT-AACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTT 110662 Query 44308 TCCCGT 44313 || || Sbjct 110661 GCCAGT 110656 >seq534 Length=453533 Score = 102 bits (112), Expect = 6e-17 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| || ||| | || || |||||||| || ||||||| Sbjct 392642 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 392701 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| |||||||| || | ||| | || ||||| || |||||| ||| || ||| Sbjct 392702 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 392761 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || || |||| ||| || ||||| | || || ||||| ||||| | |||||| || Sbjct 392762 --CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 392819 Query 44326 GAAG 44329 |||| Sbjct 392820 GAAG 392823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359987771957583