Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq59 102 2e-16 seq26 89.7 1e-12 >seq59 Length=149784 Score = 102 bits (112), Expect = 2e-16 Identities = 303/462 (66%), Gaps = 8/462 (2%) Strand=Plus/Plus Query 230180 AGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCA 230239 |||||||||| |||| | ||||| ||||| | || ||||| ||| | ||| Sbjct 65644 AGCGTCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCA 65703 Query 230240 TCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCA 230299 | || |||||| ||| ||| | ||| ||||||| | || |||||| ||||| Sbjct 65704 TTTTCTGGCTGAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCT 65763 Query 230300 GTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACA 230359 || |||||||||||||| | |||| | || | | || | || ||| Sbjct 65764 CCCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCACCTT-AGACAC 65822 Query 230360 AGCTACCATTCGAGACGG---TCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGG 230416 || ||| | ||| || || || | ||||||| || || || | ||| | | Sbjct 65823 CGC--CCAAGCAAGAAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAG 65880 Query 230417 AGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTT-ATGGGA 230475 ||||| | ||| || |||| ||| || | ||||||||||| ||||| ||| Sbjct 65881 AGTTCCTGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGC-CAACTTGATGAAG 65939 Query 230476 CAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTAC 230535 || ||||| || ||||| |||||| | | | | | || ||| ||||||| ||| Sbjct 65940 CAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTAC 65999 Query 230536 AACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTC 230595 || || |||||||| | || |||||| ||| || | ||| |||||||||||| Sbjct 66000 AAGTCGGCCAACCCCTTCGACTTCATGGAGAACATCTCCTTGGCAGGAAAGACCAACTTC 66059 Query 230596 TTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||| |||||||| ||||| || | | ||||||| ||| Sbjct 66060 TTCGAGAAGCGTGTTGCCGACTACCAAAAGACTGGTGTCATG 66101 >seq26 Length=199157 Score = 89.7 bits (98), Expect = 1e-12 Identities = 199/299 (67%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 319369 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 319428 |||| |||||| ||| | ||||| || ||| ||||| |||| || || |||||| Sbjct 96852 AGGGTGTAGTAGCTCTTAGCCTCGGGCTTCTGCTTGACGAAATCGGCCAAGTTACCCTTG 96793 Query 319429 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 319488 || |||||| || ||||| ||| || ||||| || | |||||| Sbjct 96792 TAGCAGGCCAGCTTCTTTCCGGGCTCGTAGTGGTAGATGTCCGTGCAGACTTCATCGAGG 96733 Query 319489 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 319548 || ||||||||||| || || |||| | | | | || | || | ||||||| || Sbjct 96732 AAGCCGGAGTCGTGAGAAACGATCAGGGAGGTGATCTCGGTGTGGGTCTTCAGGTAATCC 96673 Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608 | |||| | ||||| | ||| | || ||||| || ||||| ||||| || | Sbjct 96672 TGGAGCCACTTGACGTTGGCAACATCCAAGTGATTGGTAGGTTCGTCCAGAAGGAGAACA 96613 Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667 | || |||| | ||| || | ||||||||||| ||||| ||||| || ||||| || Sbjct 96612 TCGGCCTTCATCAACATAGCTCTGGCAAGAGCGAGCTTCATCTTCCATCCACCGGACAG 96554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057812398315280