Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq59 114 2e-20 >seq59 Length=149784 Score = 114 bits (126), Expect = 2e-20 Identities = 554/868 (64%), Gaps = 20/868 (2%) Strand=Plus/Minus Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890 ||| || || | |||||||| || | ||||| || ||||| || || || || ||| | Sbjct 66101 CATGACACCAGTCTTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCTGC 66042 Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCC 23950 || || || || |||||||| ||| | || |||| || ||| | ||| | | | Sbjct 66041 CAAGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGCCGACTTGTAG-TACTTCTCGTTAC 65983 Query 23951 CAATTCAGAA-ATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAAT 24009 | | ||| | || || || ||||| ||||| || ||| ||||||| | | Sbjct 65982 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 65923 Query 24010 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 24069 |||| || | || | ||||| ||| |||| || || ||||| || || ||| | Sbjct 65922 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAGGAACTCTTGCTCGATGCTGACAG 65863 Query 24070 CGTCTGTTATAATAGATCTT--ACTGT-TTCTTCACTCGGTGGATACAATAAATGTTTAA 24126 | || || || | |||| || | ||||| | || || | | | || | Sbjct 65862 CCTCGGTAATGACG--TCTTGGACGGCCTTCTTGCTTGGGCGGTGTCTA-AGGTGGGAGA 65806 Query 24127 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 24186 | | | || ||||| || ||| ||||||||||| | || | |||||||| | Sbjct 65805 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGA 65746 Query 24187 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 24246 | || || || | ||| || |||||||| || ||||| || ||||| || || || || | Sbjct 65745 AGGTCAGGCCAGCCATGAGACCACGCTTCTTCAGCCAGAAAATGGAGGCGAAGGAACCGG 65686 Query 24247 AAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGC 24303 | ||||| || || || || || || ||||||| || | | | || || | Sbjct 65685 AGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAGTCCT 65626 Query 24304 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 24363 |||| || |||||| | ||||| ||||||||||| || | ||||| || ||||| | Sbjct 65625 TGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGA 65566 Query 24364 TAGCATTAAAGAGATAGtttttttCA--TTACTATCTTTAACATATGTATCAATCAAAAG 24421 | ||||| ||||| || | || | || | || || | ||||| || || | || Sbjct 65565 TGGCATTGAAGAGGTATGTGCGTTGAGCTTGC--TCCTTGATGTATGTGTCGATGAGGAG 65508 Query 24422 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 24481 || | || | |||||||| || || ||||| || |||||||| || | || Sbjct 65507 GGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGC 65448 Query 24482 CTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 24541 || | || || || || | | || || || | || || || || |||||||| Sbjct 65447 TTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTC 65388 Query 24542 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTG-TTA 24597 | || || || || || | || || || || || | ||||| | || Sbjct 65387 AGACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAGCGCTCATCGTC-GTTGAGGC 65329 Query 24598 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 24657 | || ||||| || | | || || || | ||| | || || ||||||| || || | Sbjct 65328 GGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACG 65269 Query 24658 CCTCTGCCTTTTTATACATATTCCAGAT 24685 |||| ||||| || ||||| | |||||| Sbjct 65268 CCTCGGCCTTCTTGTACATCTGCCAGAT 65241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593715247178880