Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq59 352 3e-92 seq4 127 2e-24 seq168 118 1e-21 seq41 105 7e-18 >seq59 Length=149784 Score = 352 bits (390), Expect = 3e-92 Identities = 570/813 (70%), Gaps = 25/813 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||||||||| |||||||| | |||||| | || || Sbjct 65241 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCTTTCTGGACAGCAGAGGAGATTGATCTC 65300 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | ||| | |||||| | |||||| | ||||| Sbjct 65301 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAACGACGATGAGCGCTACTTCATTTCC 65360 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || |||||||| ||||| || ||||||||||| || ||||||| Sbjct 65361 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 65420 Query 116813 TTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||| ||||| || | | || || || ||||||||||| || || ||| || Sbjct 65421 TTCAG-CAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGAT 65479 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 |||||| | ||| | || | || || |||||||||||| ||| | | Sbjct 65480 CGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCA---------A 65530 Query 116932 GGAG-AAGCTC------CGTT--TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGA 116982 |||| |||||| | | | || || ||||||||||| || || ||| |||| | Sbjct 65531 GGAGCAAGCTCAACGCACATACCTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAA 65590 Query 116983 GAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCT 117042 ||||||||| ||||| | | |||||| | || || || | |||| |||| || Sbjct 65591 GAAGGCCGACTGGGCAGTTAGGTGGATCCAAGACAAGGACTCCACTTTCGCTCAGCGTCT 65650 Query 117043 GGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTG 117102 || |||||||| ||||| ||||| ||||||| || || |||||| |||| || || Sbjct 65651 CGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTG 65710 Query 117103 GCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGA 117162 ||| ||||| || || |||||| | |||||||| ||| |||||||||||||||| | || Sbjct 65711 GCTGAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGA 65770 Query 117163 CGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAG 117222 ||||||||| || ||||| ||||| | || ||| || | || || || || Sbjct 65771 CGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCACCTTAGACACCGCCCAAG 65830 Query 117223 CGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCAC 117282 | | | |||| || || | ||||| || ||| ||||||||| ||||| || Sbjct 65831 CAAGAAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCCTGAC 65890 Query 117283 CGAAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCG 117341 || || | | || ||||| ||||| || | || | | |||| ||||||||| | Sbjct 65891 TGAGGCACTTCCCTGTGCG-CTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTG 65949 Query 117342 AGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCA 117401 |||||||||||||||||||||||||| || | || ||| ||||||| || ||| Sbjct 65950 AGTTCGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGTCGGCCA 66009 Query 117402 ACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 |||| | ||||| ||| | ||||||||||| Sbjct 66010 ACCCCTTCGACTTCATGGAGAACATCTCCTTGG 66042 >seq4 Length=289853 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || |||||||| || |||||| | || || || | || Sbjct 37390 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 37331 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | ||||| || || | ||||| ||||| || ||| |||||||| Sbjct 37330 GATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 37271 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || |||| |||||||| ||||||||| Sbjct 37270 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 37211 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| || || Sbjct 37210 ATCCAGAAGGAGTCCACCCTTCA 37188 >seq168 Length=66023 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| |||||||| | || || || | || Sbjct 53376 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 53435 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| || || | ||||| |||||||| || |||||||| Sbjct 53436 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 53495 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | ||||||||| ||||| || |||| ||||| ||| |||||||||| Sbjct 53496 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 53555 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||||||| | || || || Sbjct 53556 ATTCAGAAGGAGTCGACTCTTCA 53578 Score = 114 bits (126), Expect = 1e-20 Identities = 135/180 (75%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| ||||||||| | || ||||| | | || | | | | |||| | ||| Sbjct 53172 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGTCTGATACCATCGACAACGTT-AAGAG 53230 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | ||||| ||||| || ||| ||||||||||||| || |||| ||| ||||| Sbjct 53231 CAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAA 53290 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 || || || |||| ||||||||| |||||||||||||||||||||| | || || || Sbjct 53291 GCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 53350 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || || || || || || | || |||||| | | Sbjct 53832 ATGCAAATTTTCGTCAAGACCCTTACCGGAAAGACAATTACGCTGGAAGTCGAATCGTCG 53891 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || || | || || ||||||||||| ||||||| Sbjct 53892 GATACCATCGATAACG-TCAAGTCCAAGATCCAAGATAAGGAGGGCATCCCACCGGACCA 53950 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||||||||| ||||| || || | || ||||| || ||||| Sbjct 53951 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAAGATGGCCGTACCCTGTCTGATTACAA 54010 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | ||| ||||||| || Sbjct 54011 CATCCAGAAGGAGTCTACGTTGCATCTTGT 54040 >seq41 Length=173993 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || | |||||||| ||||||||| | || ||||| || |||| | | Sbjct 152437 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 152378 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || |||| ||||| ||||| || || |||||||||| || || Sbjct 152377 GACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCTG 152318 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || ||||| ||||| || || | ||||| || ||||||||||||||||||| Sbjct 152317 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 152258 Query 40879 G 40879 | Sbjct 152257 G 152257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515213687154560