Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201
6-06-24] 856 sequences; 33,292,581 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq168 111 2e-19
seq4 107 2e-18
>seq168
Length=66023
Score = 111 bits (122), Expect = 2e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
|||||||||| || |||||| ||||| |||||||| | ||| || || | || ||
Sbjct 53812 ACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGACAGGGTGCGGCCATCCTCC 53753
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
| |||||||||||| || || || ||||||||||| | || | | |||||||||| ||
Sbjct 53752 AACTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC-TG 53694
Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
| | || | |||| | | | || || |||||||| || | ||| || || ||
Sbjct 53693 AATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTT 53634
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||||| || ||||| ||||| || |||||
Sbjct 53633 GCCCGTAAGAGTCTTGACAAAAATCTGCAT 53604
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| ||||| || | ||||| || |||| || |||||||| || |||||
Sbjct 53567 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAA 53508
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | || |||||||||| ||| || || | |
Sbjct 53507 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 53448
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||| ||| || || || | |||||||| ||||| || || ||||| ||
Sbjct 53447 GTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTAAGGGTCTTGAC 53388
Query 43172 AAAGATTTGCAT 43183
||||| |||||
Sbjct 53387 GAAGATCTGCAT 53376
Score = 93.3 bits (102), Expect = 5e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039
|||||| || |||||| || || |||||||||| ||| || || | || || |||||
Sbjct 54035 ATGCAACGTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCTTCAAGCTG 53976
Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099
||| || ||||| || || ||||||||||| | || | || |||||| || ||| ||
Sbjct 53975 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTT 53916
Query 43100 TTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159
|||| | | | || || |||||| || || | ||| || || || || ||
Sbjct 53915 GGACTTGACGTTATCGATGGTATCCGACGATTCGACTTCCAGCGTAATTGTCTTTCCGGT 53856
Query 43160 TAGCGTCTTTACAAAGATTTGCAT 43183
|| ||||| || || ||||||||
Sbjct 53855 AAGGGTCTTGACGAAAATTTGCAT 53832
>seq4
Length=289853
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
||||| || | ||| |||||| || || ||||| || | || || || |||| ||
Sbjct 37182 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 37241
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|||||||| || ||||| || || ||||||||||| | || | | |||||||||| |
Sbjct 37242 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 37301
Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154
|| || |||| | | | || ||| ||| ||||| || | ||||| || |||
Sbjct 37302 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 37361
Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| || ||||| || |||||||||||
Sbjct 37362 CCCGTCAGGGTCTTCACGAAGATTTGCAT 37390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571811481551680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |