Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201
6-06-24] 856 sequences; 33,292,581 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq59 197 1e-45
seq122 127 2e-24
seq168 120 3e-22
seq4 104 2e-17
>seq59
Length=149784
Score = 197 bits (218), Expect = 1e-45
Identities = 496/745 (67%), Gaps = 23/745 (3%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| ||||| || || || || ||||| | || || | || ||
Sbjct 65241 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCTTTCTGGACAGCAGAGGAGATTGATCTC 65300
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| ||||| || ||| ||| | || |||| || |||| | | || |||
Sbjct 65301 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAACGACGATGAGCGCTACTTCATTTCC 65360
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||||| | || || |||||||| || || || ||||| |||||||| | |||| |
Sbjct 65361 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 65420
Query 57747 TTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804
|| || || | || ||| | | || || | ||||| ||||| || ||| | |
Sbjct 65421 TT--CAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGA 65478
Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-CAAC 57863
| || ||| | || | || | || || || |||||||| || ||| | ||||| |||
Sbjct 65479 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAAG 65538
Query 57864 GACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923
| | || || || ||||| || ||||| || || || ||| ||||||||
Sbjct 65539 CTCAACGCACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 65597
Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980
|| ||| || | | ||||| || | || || |||| ||||| || | || |
Sbjct 65598 GACTGGGCAGTTAGGTGGATCCAA---GACAAGGACTCCACTTTCGCTCAGCGTCTCGTT 65654
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| ||||||||||| || ||||| ||||| || || ||| || | || || ||| ||
Sbjct 65655 GCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGCTG 65714
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
||||| || || || ||| | |||||||| || ||||||| | || || || ||||||
Sbjct 65715 AAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAG 65774
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG---ACG 58157
|||||||| ||||| || || ||||| | | ||| ||| || | | |||| | |
Sbjct 65775 GGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCACCTT----AGACACCGCCCAAG 65830
Query 58158 CGGGATCG-CATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216
| || | | || ||| | || |||||||| ||| ||||| | ||||| | ||
Sbjct 65831 CAAGAAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCCTGAC 65890
Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276
|| || || || || ||||||| |||||| | |||||| | ||||||||
Sbjct 65891 TGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 65950
Query 58277 GTTTGTTGCCGACAGACTTTTGCTC 58301
||| || |||||||| || |||||
Sbjct 65951 GTTCGTCGCCGACAGGCTGCTGCTC 65975
>seq122
Length=96280
Score = 127 bits (140), Expect = 2e-24
Identities = 356/541 (66%), Gaps = 9/541 (2%)
Strand=Plus/Plus
Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202
||||||| || || |||||||| ||||| || || | ||||| | ||| || || |
Sbjct 5001 TGGTGCGGAGGTAGTACATGCCGGTCTTGAGGCCGAGTTTCCAGCCAGCAAAGTGCATGG 5060
Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262
| || | || || | || | ||||| | |||| ||||| ||||||||
Sbjct 5061 ATGTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGA 5120
Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322
| || ||||| || || |||||||| | | | || ||| || || ||||| ||||
Sbjct 5121 TGAAGGCTCCACGGTCAGCGGCCATCTGGACGATGGTGCGCTGGGAGATCTCCCAGACGG 5180
Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382
||||||| || | | || || || || ||| |||||| ||| || |
Sbjct 5181 TCTTGTAGAGGGCCTTAATGTCGGCGGGGATGTTGGGGATGTTCTGGATGGAACCTCCGT 5240
Query 22383 -TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTG 22441
|| | ||||| || || || | ||| ||||| ||| ||| || ||| || |||
Sbjct 5241 CTGCG-ATGATGCGGTTCTTCATGTTGTCGGACCACAGACCCATGTCGACCAAGTCCTTG 5299
Query 22442 ACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTG 22501
| || |||| || ||||| |||||||| | || ||| ||||| |||||||||
Sbjct 5300 AGCAACCAGGGGTTGACGACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAAATGTTC 5359
Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561
|| ||| | || ||||| | || ||| || || ||||| | ||| ||||| || |||
Sbjct 5360 GAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGC 5419
Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCA 22619
|| || || | || || ||||| | | ||||||| |||| | || |||
Sbjct 5420 ATGGGTGCAACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAG 5479
Query 22620 TCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGC 22679
|| |||||||||||| |||| || || || | ||||||| ||||| || | | |||
Sbjct 5480 TC--CCAGTCCCACAGGTCGGTAGGGGTGAC---GCCCCACATGTCGTACTGGAGCTCGC 5534
Query 22680 C 22680
|
Sbjct 5535 C 5535
>seq168
Length=66023
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || ||||| |||||
Sbjct 53376 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 53435
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || || || ||||||||| ||| | || || ||||||
Sbjct 53436 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 53495
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||| ||||| ||| | || ||| | ||| | ||| || |||
Sbjct 53496 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 53555
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || ||||||||||| |||| ||| | || | || ||||
Sbjct 53556 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGTGGTGGTA 53604
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| || |||||||| || ||||| ||||| || | || || ||| | ||
Sbjct 53604 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCT 53663
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | ||||| || || ||||||||| || | || || ||||||
Sbjct 53664 GATACCATTGATAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 53723
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || ||||| || |||||||| || || || ||||| |||
Sbjct 53724 CAGCGCCTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGCACCCTGTCGGATTACAAC 53783
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || ||||| || ||| |||| ||
Sbjct 53784 ATTCAGAAGGAGTCGACCCTGCATTTGGTTCT 53815
>seq4
Length=289853
Score = 104 bits (114), Expect = 2e-17
Identities = 167/240 (70%), Gaps = 4/240 (2%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| ||||| ||||| ||||| ||||| || |||||| | || || || ||||
Sbjct 37391 CATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTC 37332
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||| | | |||| | ||||| | || ||||||||| || | || || |||||
Sbjct 37331 CGATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 37272
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || ||||| ||||| ||| | || ||| || | || || ||
Sbjct 37271 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 37212
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427
||| || || || || || ||||| |||| || ||||| | || ||| |||||||
Sbjct 37211 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTGAGACTCCGTGGAGGTGCCAAGAAGCG 37152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445761630299520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |