Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq59 197 1e-45 seq122 127 2e-24 seq168 120 3e-22 seq4 104 2e-17 >seq59 Length=149784 Score = 197 bits (218), Expect = 1e-45 Identities = 496/745 (67%), Gaps = 23/745 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || || || || ||||| | || || | || || Sbjct 65241 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCTTTCTGGACAGCAGAGGAGATTGATCTC 65300 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | || |||| || |||| | | || ||| Sbjct 65301 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAACGACGATGAGCGCTACTTCATTTCC 65360 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||| || || || ||||| |||||||| | |||| | Sbjct 65361 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 65420 Query 57747 TTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 || || || | || ||| | | || || | ||||| ||||| || ||| | | Sbjct 65421 TT--CAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGA 65478 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-CAAC 57863 | || ||| | || | || | || || || |||||||| || ||| | ||||| ||| Sbjct 65479 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAAG 65538 Query 57864 GACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 | | || || || ||||| || ||||| || || || ||| |||||||| Sbjct 65539 CTCAACGCACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 65597 Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980 || ||| || | | ||||| || | || || |||| ||||| || | || | Sbjct 65598 GACTGGGCAGTTAGGTGGATCCAA---GACAAGGACTCCACTTTCGCTCAGCGTCTCGTT 65654 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||||||||| || ||||| ||||| || || ||| || | || || ||| || Sbjct 65655 GCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGCTG 65714 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || || || ||| | |||||||| || ||||||| | || || || |||||| Sbjct 65715 AAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAG 65774 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG---ACG 58157 |||||||| ||||| || || ||||| | | ||| ||| || | | |||| | | Sbjct 65775 GGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCCCACCTT----AGACACCGCCCAAG 65830 Query 58158 CGGGATCG-CATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | || | | || ||| | || |||||||| ||| ||||| | ||||| | || Sbjct 65831 CAAGAAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAAGAGTTCCTGAC 65890 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 || || || || || ||||||| |||||| | |||||| | |||||||| Sbjct 65891 TGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 65950 Query 58277 GTTTGTTGCCGACAGACTTTTGCTC 58301 ||| || |||||||| || ||||| Sbjct 65951 GTTCGTCGCCGACAGGCTGCTGCTC 65975 >seq122 Length=96280 Score = 127 bits (140), Expect = 2e-24 Identities = 356/541 (66%), Gaps = 9/541 (2%) Strand=Plus/Plus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 ||||||| || || |||||||| ||||| || || | ||||| | ||| || || | Sbjct 5001 TGGTGCGGAGGTAGTACATGCCGGTCTTGAGGCCGAGTTTCCAGCCAGCAAAGTGCATGG 5060 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 | || | || || | || | ||||| | |||| ||||| |||||||| Sbjct 5061 ATGTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGA 5120 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322 | || ||||| || || |||||||| | | | || ||| || || ||||| |||| Sbjct 5121 TGAAGGCTCCACGGTCAGCGGCCATCTGGACGATGGTGCGCTGGGAGATCTCCCAGACGG 5180 Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382 ||||||| || | | || || || || ||| |||||| ||| || | Sbjct 5181 TCTTGTAGAGGGCCTTAATGTCGGCGGGGATGTTGGGGATGTTCTGGATGGAACCTCCGT 5240 Query 22383 -TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTG 22441 || | ||||| || || || | ||| ||||| ||| ||| || ||| || ||| Sbjct 5241 CTGCG-ATGATGCGGTTCTTCATGTTGTCGGACCACAGACCCATGTCGACCAAGTCCTTG 5299 Query 22442 ACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTG 22501 | || |||| || ||||| |||||||| | || ||| ||||| ||||||||| Sbjct 5300 AGCAACCAGGGGTTGACGACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAAATGTTC 5359 Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561 || ||| | || ||||| | || ||| || || ||||| | ||| ||||| || ||| Sbjct 5360 GAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGC 5419 Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCA 22619 || || || | || || ||||| | | ||||||| |||| | || ||| Sbjct 5420 ATGGGTGCAACGAGCAGGGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAG 5479 Query 22620 TCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGC 22679 || |||||||||||| |||| || || || | ||||||| ||||| || | | ||| Sbjct 5480 TC--CCAGTCCCACAGGTCGGTAGGGGTGAC---GCCCCACATGTCGTACTGGAGCTCGC 5534 Query 22680 C 22680 | Sbjct 5535 C 5535 >seq168 Length=66023 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || ||||| | || ||||| ||||| Sbjct 53376 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 53435 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||| ||| | || || |||||| Sbjct 53436 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 53495 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| | || ||| | ||| | ||| || ||| Sbjct 53496 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 53555 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || ||||||||||| |||| ||| | || | || |||| Sbjct 53556 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGTGGTGGTA 53604 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||||| || ||||| ||||| || | || || ||| | || Sbjct 53604 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCT 53663 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| || || ||||||||| || | || || |||||| Sbjct 53664 GATACCATTGATAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 53723 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct 53724 CAGCGCCTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGCACCCTGTCGGATTACAAC 53783 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || ||||| || ||| |||| || Sbjct 53784 ATTCAGAAGGAGTCGACCCTGCATTTGGTTCT 53815 >seq4 Length=289853 Score = 104 bits (114), Expect = 2e-17 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| ||||| ||||| || |||||| | || || || |||| Sbjct 37391 CATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTC 37332 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | | |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 37331 CGATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 37272 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || ||| || | || || || Sbjct 37271 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 37212 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 ||| || || || || || ||||| |||| || ||||| | || ||| ||||||| Sbjct 37211 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTGAGACTCCGTGGAGGTGCCAAGAAGCG 37152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761630299520