Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq122 104 5e-17 seq59 102 2e-16 >seq122 Length=96280 Score = 104 bits (114), Expect = 5e-17 Identities = 178/256 (70%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| ||||| |||||||| ||||| || || | ||| || || ||||| |||||| Sbjct 6482 CCGATACCTCCGGCAGTCTTTGAGATCATGGCACACGTCTTGAGTGTGTCATAGATACCC 6541 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904 ||||| ||||| || | | | | | | |||||| || || || |||| |||| ||| Sbjct 6542 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCTTGTG-GTGT 6600 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| ||| || || || ||||| || || || || || | |||||||| | || Sbjct 6601 ACCAGCATTGAAGAGCGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 6660 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 ||| || || | || || ||||||||||| || || |||||||||||||| Sbjct 6661 TGTCTCGATTGTCTTCTCAATATCCTCACCGTGAATGCCCACGGCAACACGCATAATCAT 6720 Query 95025 GTCCTGAGGGCGCTCA 95040 || ||| || | |||| Sbjct 6721 GTGCTGTGGCCTCTCA 6736 >seq59 Length=149784 Score = 102 bits (112), Expect = 2e-16 Identities = 158/225 (70%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGA---TTTGGC 101907 |||||||||||||| | ||||| ||| ||||| ||| ||| || ||| || Sbjct 65582 CATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAGACAAGGACTCCACTTTCGC 65641 Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967 | | | |||||||| || || ||||| || |||||||| ||| | ||||| || Sbjct 65642 TCAGCGTCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTC 65701 Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 |||||||||| | ||||| | ||| | || |||| || |||| |||||| ||| |||| Sbjct 65702 CATTTTCTGGCTGAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCAT 65761 Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || | ||||| ||||| || ||||| || ||| | || || Sbjct 65762 CTCCCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTT 65806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989573146737480