Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201
6-06-24] 856 sequences; 33,292,581 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq122 179 5e-40
seq59 131 2e-25
>seq122
Length=96280
Score = 179 bits (198), Expect = 5e-40
Identities = 416/619 (67%), Gaps = 6/619 (1%)
Strand=Plus/Plus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
|| ||||| || || |||| | |||||| ||| ||||| | || ||||| | | |
Sbjct 6125 TCAAACTCATCGCCGTAAACGTCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTC 6184
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307
|| || |||| | || || || ||||| |||||||| || ||||| ||||| ||| ||
Sbjct 6185 CAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGC-ATAGAA 6243
Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367
| || | | | |||||| || || |||||| | || || |||||| | |
Sbjct 6244 CAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCAGGAACTCAAA 6303
Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427
| ||| | ||||| || || | ||| ||||| | | | ||||| || ||||| || ||
Sbjct 6304 GACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACC 6363
Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487
||| || | ||| || |||||||| || | || | | ||| |||| |||||||| ||
Sbjct 6364 CTGGTCAACGTACCTCGCGGTGTTGTTGAACACGCGGAGCATGGGAACGATACCGTTCGA 6423
Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547
| || |||||||||| || || | ||| ||||||| ||| | || | ||
Sbjct 6424 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCC 6483
Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC-GTGTCATAGATGCCTT 63606
|| || || || | || ||||| | || || ||| || | ||||||||||| || |
Sbjct 6484 GATACCTCCGGCAGTCTTTGAGATCATGGCACA-CGTCTTGAGTGTGTCATAGATACCCT 6542
Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666
| || ||||| || |||||| | | || ||| |||| ||| | | || |
Sbjct 6543 CAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCTTGTGGTGTAC 6602
Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726
| ||||| || | || || || ||||| || || |||| ||| | || ||||| |
Sbjct 6603 CAGCATTGAAGAGCGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATG 6662
Query 63727 TCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATG 63785
|||| || | || |||||| || | ||||| || || || |||||||| | ||||
Sbjct 6663 TCTCGATTGTCTTCTCAATATCCTCACCG-TGAATGCCCACGGCAACACGCATAATCATG 6721
Query 63786 TGCTGAGGTCTTTCAACAA 63804
||||| || || ||| |||
Sbjct 6722 TGCTGTGGCCTCTCAGCAA 6740
>seq59
Length=149784
Score = 131 bits (144), Expect = 2e-25
Identities = 365/554 (66%), Gaps = 7/554 (1%)
Strand=Plus/Minus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
||| || || | |||||||| || | ||||| || ||||| || || || |||||| |
Sbjct 66101 CATGACACCAGTCTTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCTGC 66042
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397
||| || || || |||||||| || || || |||| ||||| | || | | |
Sbjct 66041 CAAGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGCCGACTTGTAG-TACTTCTCGTTAC 65983
Query 33398 CAATTCAGAA-ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456
| | ||| | || || || |||||||| || || ||| ||||||| | |
Sbjct 65982 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 65923
Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCG 33516
|||| || | || | ||||| ||| |||| || || ||||| || ||| || |
Sbjct 65922 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAGGAACTCTTGCTCGATGCTGACAG 65863
Query 33517 CATTTGTTATAATAAATCTAACGGT-TTCTTCACTCGGTGGATGTAATAAATGTTTAAAC 33575
| | || || | | |||| ||||| | || || ||| | || ||
Sbjct 65862 CCTCGGTAATGACGTCTTGGACGGCCTTCTTGCTTGGGCGG-TGTCTAAGGTGGGAGAAG 65804
Query 33576 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAAC 33635
| | || ||||| || ||| ||||||||||| | || | ||||| || ||
Sbjct 65803 AGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAG 65744
Query 33636 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAA 33695
|| || || | ||| || |||||||| || ||||| || ||||| ||||| || |||||
Sbjct 65743 GTCAGGCCAGCCATGAGACCACGCTTCTTCAGCCAGAAAATGGAGGCGAAGGAACCGGAG 65684
Query 33696 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTG 33752
|||||||| || || || || || ||||||| || | || | || || | ||
Sbjct 65683 AAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAGTCCTTG 65624
Query 33753 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33812
|| || |||||| | ||||| ||||||||||| || | ||||| || || || |||
Sbjct 65623 TCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATG 65564
Query 33813 GCATTAAAGAGATA 33826
||||| ||||| ||
Sbjct 65563 GCATTGAAGAGGTA 65550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629810860951680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |