Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq59 114 2e-20 >seq59 Length=149784 Score = 114 bits (126), Expect = 2e-20 Identities = 365/561 (65%), Gaps = 14/561 (2%) Strand=Plus/Minus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || ||||| || ||| ||||||||||| | || | |||||||| || || || Sbjct 65797 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGG 65738 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 || | ||| || |||||||| || ||||| || ||||| || || || || || ||||| Sbjct 65737 CCAGCCATGAGACCACGCTTCTTCAGCCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAG 65678 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 36334 || || || || || || ||||||| || | || | || || | |||| || Sbjct 65677 ATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAGTCCTTGTCTTGG 65618 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 |||||| | ||||| ||||||||||| || | ||||| || ||||| || ||||| Sbjct 65617 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 65558 Query 36395 AAGAGATAGtttttttCA--TTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 36452 ||||| || | || | || | || || | ||||| || || | || || Sbjct 65557 AAGAGGTATGTGCGTTGAGCTTGC--TCCTTGATGTATGTGTCGATGAGGAGGGAGTATG 65500 Query 36453 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 36512 | || | |||||||| || || ||||| || |||||||| || | || || | | Sbjct 65499 TCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 65440 Query 36513 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 36572 | || || || | | || || || | || || || || ||||||||| || | Sbjct 65439 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGG 65380 Query 36573 CAAAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGT--TTGGTGTTAGTTTATT 36627 | || || || | || || || || || | |||| ||| | | || || Sbjct 65379 CGAAGAAAGCGAGAACGTGGGAAATGAAGTAGCGCTCATCGTCGTTGAGG--CGGTTGTT 65322 Query 36628 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 36687 ||| || | | || || || | ||| | || || ||||||| || || ||||| || Sbjct 65321 CCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACGCCTCGGC 65262 Query 36688 CTTTTTATACATATTCCAGAT 36708 ||| || ||||| | |||||| Sbjct 65261 CTTCTTGTACATCTGCCAGAT 65241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658165757551040