Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq59 136 6e-27 >seq59 Length=149784 Score = 136 bits (150), Expect = 6e-27 Identities = 366/554 (66%), Gaps = 7/554 (1%) Strand=Plus/Minus Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715 ||| || || | |||||||| || | ||||| || ||||| || || || |||||| | Sbjct 66101 CATGACACCAGTCTTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCTGC 66042 Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775 ||| || || || |||||||| || || || |||| || || | || | | | Sbjct 66041 CAAGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGCCGACTTGTAG-TACTTCTCGTTAC 65983 Query 49776 CAATTCAGAA-ATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834 | | ||| | || || || ||||| || || || ||| ||||||| | | Sbjct 65982 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 65923 Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894 |||| || | || | ||||| ||| |||| || || ||||| || ||| || | Sbjct 65922 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAGGAACTCTTGCTCGATGCTGACAG 65863 Query 49895 CATCTGTTATAATAGATCTAACGGT-TTCTTCACTCGGTGGATGCAATAAATGTTTAAAC 49953 | || || || | | |||| ||||| | || || | | | || || Sbjct 65862 CCTCGGTAATGACGTCTTGGACGGCCTTCTTGCTTGGGCGGTGTCTA-AGGTGGGAGAAG 65804 Query 49954 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAAC 50013 | | || ||||| || ||| ||||||||||| | || || |||||||| || Sbjct 65803 AGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAG 65744 Query 50014 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAA 50073 || || || | ||| || |||||||| || ||||| || ||||| || || || || || Sbjct 65743 GTCAGGCCAGCCATGAGACCACGCTTCTTCAGCCAGAAAATGGAGGCGAAGGAACCGGAG 65684 Query 50074 AAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTG 50130 |||||||| || || || ||||| |||||||| || | || | || ||| | || Sbjct 65683 AAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAGTCCTTG 65624 Query 50131 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 50190 || || |||||| | ||||| ||||||||||| || | ||||| || || || ||| Sbjct 65623 TCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATG 65564 Query 50191 GCATTAAAGAGATA 50204 ||||| ||||| || Sbjct 65563 GCATTGAAGAGGTA 65550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718261114523840