Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201
6-06-24] 856 sequences; 33,292,581 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq59 114 2e-20
>seq59
Length=149784
Score = 114 bits (126), Expect = 2e-20
Identities = 553/868 (64%), Gaps = 20/868 (2%)
Strand=Plus/Minus
Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820
||| || || | |||||||| || | ||||| || ||||| || || ||||||||| |
Sbjct 66101 CATGACACCAGTCTTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCTGC 66042
Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880
||| || || || |||||||| || || || |||| || || | || | | |
Sbjct 66041 CAAGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGCCGACTTGTAG-TACTTCTCGTTAC 65983
Query 41881 CAATTCAGAA-ATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939
| | ||| | || || || |||| ||| || || ||| ||||||| | |
Sbjct 65982 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 65923
Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999
|||| || | || | ||||| ||| |||| || || ||||| || || ||| |
Sbjct 65922 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAGGAACTCTTGCTCGATGCTGACAG 65863
Query 42000 CGTCTGTTATAATAGATCTT--ACTGT-TTCTTCACTCGGTGGATACAATAAATGTTTAA 42056
| || || || | |||| || | ||||| | || || | | | || |
Sbjct 65862 CCTCGGTAATGACG--TCTTGGACGGCCTTCTTGCTTGGGCGGTGTCTA-AGGTGGGAGA 65806
Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116
| | | || ||||| || ||| |||||||| || | || | |||||||| |
Sbjct 65805 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGA 65746
Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAG 42176
| || || || | ||| || |||||||| || ||||| || || || || || || || |
Sbjct 65745 AGGTCAGGCCAGCCATGAGACCACGCTTCTTCAGCCAGAAAATGGAGGCGAAGGAACCGG 65686
Query 42177 AAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CAC 42233
| |||||||| || || || || || ||||||| || | || | || || |
Sbjct 65685 AGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAGTCCT 65626
Query 42234 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293
|||| || |||||| | ||||| ||||||||||| || | ||||| || || || |
Sbjct 65625 TGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGA 65566
Query 42294 TGGCATTAAAGAGATAGtttttttCA--TTACTATCTTTAACATATGTATCGATCAAAAG 42351
||||||| ||||| || | || | || | || || | ||||| ||||| | ||
Sbjct 65565 TGGCATTGAAGAGGTATGTGCGTTGAGCTTGC--TCCTTGATGTATGTGTCGATGAGGAG 65508
Query 42352 ACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGC 42411
|| | || | |||||||| || || || || || |||||||| || | |||
Sbjct 65507 GGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGC 65448
Query 42412 CTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTC 42471
|| | | || || || | | || || || | || ||||| || ||||||||
Sbjct 65447 TTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTC 65388
Query 42472 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA--- 42528
| || || || || || | || || || || || || | || ||| |
Sbjct 65387 AGACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAGCGCTCAT-CGTCGTTGAGGC 65329
Query 42529 -TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATG 42587
|| ||||| || | | || || || | ||| | || ||| | ||||| || || |
Sbjct 65328 GGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACG 65269
Query 42588 CTTCTGCCTTTTTATACATATTCCAGAT 42615
| || ||||| || ||||| | ||||||
Sbjct 65268 CCTCGGCCTTCTTGTACATCTGCCAGAT 65241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671132018810560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |