Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq59 187 4e-42 seq122 158 2e-33 seq32 93.3 6e-14 >seq59 Length=149784 Score = 187 bits (206), Expect = 4e-42 Identities = 377/558 (68%), Gaps = 6/558 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| || || ||||| | || ||| | ||||| Sbjct 65241 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCTTTCTGGACAGCAGAGGAGATTGATCTC 65300 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | || | | || |||||| | || || || Sbjct 65301 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAACGACGATGAGCGCTACTTCATTTCC 65360 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| || | || ||||| |||| || || ||||| |||||||| || || | || Sbjct 65361 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 65420 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 ||| ||| | || ||||| | ||||| ||||| |||||||||||||| Sbjct 65421 TTCAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 65480 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC---CG 125315 |||||| | ||| | || | ||||| || || |||| ||||| || | | Sbjct 65481 GAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAAGCT 65540 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 ||||| | | || ||||| || || ||||| || | || | || || ||||| Sbjct 65541 CAACGCACATAC---CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 65597 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| || |||||||| | ||| | | || | | ||| | | || || || Sbjct 65598 GACTGGGCAGTTAGGTGGATCCAAGACAAGGACTCCACTTTCGCTCAGCGTCTCGTTGCC 65657 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 ||||||||||| ||||| |||||||| || ||| || || |||| || ||||| ||| Sbjct 65658 TTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGCTGAAG 65717 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 ||||| || |||||| | || ||||| | |||||| | || || || |||||||| Sbjct 65718 AAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGT 65777 Query 125556 CTACACTGTGACTTTGCC 125573 || ||| |||||| ||| Sbjct 65778 CTCCACACTGACTTCGCC 65795 >seq122 Length=96280 Score = 158 bits (174), Expect = 2e-33 Identities = 365/543 (67%), Gaps = 8/543 (1%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || ||||| ||| | | || | || || |||||| | ||| ||| ||| | ||| Sbjct 6435 ACCAACGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTGTTCAA--CAACACCGCGA 6378 Query 96867 --TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 |||||| ||||| ||||| || || || || ||| | ||| ||||| | || || | Sbjct 6377 GGTACGTTGACCAGGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTCGAGCCAT 6318 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 |||||||||| || ||||| || | || || | || ||| ||| || || | | Sbjct 6317 GGCACGCGGATGTCTTTGAGTTCCTGGACCTGAGAAAGAACCACGGCAAGGAGGAAGTCC 6258 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | ||| | |||||||| ||||| |||||| | || ||| | ||||||||||| || | Sbjct 6257 GTGCCCGTGACTTGTTCTATGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGA 6198 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | ||| |||||| ||| ||||||||| || | || || || | || | | Sbjct 6197 AGAACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGACGTTTACG 6138 Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGG-CCGATACGTGAGACGA 97163 |||| ||||||||||| ||| || ||||||| | ||||| | || |||| | Sbjct 6137 GCGATGAGTTTGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGCAAGACCA 6078 Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 || | || | |||| || ||| | |||| | | ||||| ||||| |||| || Sbjct 6077 -TCAAGGC-CCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAACCC 6020 Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282 | ||| | ||||||||| | || ||||| |||||||| || | || ||||| Sbjct 6019 TTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTAGGTACCAT 5960 Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGT 97342 | ||||||| |||||||| || ||||| |||||| | | || || ||| ||| || Sbjct 5959 CCGCAGCTCCAACCTGTGCACAGAGATTGTCGAGTACTCTGCCCCAGATGAGGTGGCCGT 5900 Query 97343 TTG 97345 || Sbjct 5899 GTG 5897 >seq32 Length=184707 Score = 93.3 bits (102), Expect = 6e-14 Identities = 91/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 70046 GGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCAC 70105 ||||| |||||| | ||||| || |||| || || ||||||||||||||| ||||| Sbjct 75636 GGCTT-ACCGACCGTGCGGAGGGTGACTTGGGCCCTGTCTACGGATTCCAGTGGCGGCAC 75694 Query 70106 TCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCA 70161 | ||| |||||||||| ||| | |||| ||||| ||||| || || |||||||| Sbjct 75695 TTCGGCGCCAAGTATGTGGACGCCCAGACGGACTACTCGGGGCAAGGGGTTGATCA 75750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741051270666560