Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq168 113 1e-19 seq41 93.3 1e-13 >seq168 Length=66023 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || || || || || || | || || || | || || ||| Sbjct 53800 GTCGACTCCTTCTGAATGTTGTAATCCGACAGGGTGCGGCCATCCTCCAACTGCTTACCA 53741 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || || ||||| || || || || ||||||||||| | || Sbjct 53740 GCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTCGACTTG 53681 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||| | ||| ||||| || ||||| ||||| || ||||| || Sbjct 53680 ACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTC 53621 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 53620 TTGACAAAAATCTGCAT 53604 >seq41 Length=173993 Score = 93.3 bits (102), Expect = 1e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 ||||| || || ||||| || ||||| | || || || || || || |||||||| || Sbjct 152259 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 152318 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 || | ||| || || ||||| ||||| || || ||||||||||| | || ||||| || Sbjct 152319 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCG 152378 Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 | |||||| | || ||||| || || || ||||| || || Sbjct 152379 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 152422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151385772038048