Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201
6-06-24] 856 sequences; 33,292,581 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq168 113 1e-19
seq41 93.3 1e-13
>seq168
Length=66023
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || || || || || || | || || || | || || |||
Sbjct 53800 GTCGACTCCTTCTGAATGTTGTAATCCGACAGGGTGCGGCCATCCTCCAACTGCTTACCA 53741
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| || || ||||| || || || || ||||||||||| | ||
Sbjct 53740 GCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTCGACTTG 53681
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | |||||| | ||| ||||| || ||||| ||||| || ||||| ||
Sbjct 53680 ACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTC 53621
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 53620 TTGACAAAAATCTGCAT 53604
>seq41
Length=173993
Score = 93.3 bits (102), Expect = 1e-13
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431
||||| || || ||||| || ||||| | || || || || || || |||||||| ||
Sbjct 152259 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 152318
Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491
|| | ||| || || ||||| ||||| || || ||||||||||| | || ||||| ||
Sbjct 152319 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCG 152378
Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
| |||||| | || ||||| || || || ||||| || ||
Sbjct 152379 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 152422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151385772038048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |