Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq122 188 9e-43 seq59 131 2e-25 >seq122 Length=96280 Score = 188 bits (208), Expect = 9e-43 Identities = 421/624 (67%), Gaps = 6/624 (1%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || ||||| || || |||| | |||||||||| ||||| | || ||||| | | | Sbjct 6125 TCAAACTCATCGCCGTAAACGTCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTC 6184 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256 || || |||| | || || || ||||| |||||||| || ||||| ||||| ||| || Sbjct 6185 CAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGC-ATAGAA 6243 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 | || | || | |||||| || || |||||| | || || |||||| | | Sbjct 6244 CAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCAGGAACTCAAA 6303 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 | ||| | ||||| || || | ||| ||||| | | | ||||| || ||||| || || Sbjct 6304 GACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACC 6363 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 ||| || | ||| || |||||||| || | || | | ||| |||| |||||||| || Sbjct 6364 CTGGTCAACGTACCTCGCGGTGTTGTTGAACACGCGGAGCATGGGAACGATACCGTTCGA 6423 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63496 | || |||||||||| || || ||| ||||||| ||| | || | || Sbjct 6424 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCC 6483 Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC-GTGTCATAGATACCCT 63555 || || || || | || ||||| | || || ||| || | |||||||||||||||| Sbjct 6484 GATACCTCCGGCAGTCTTTGAGATCATGGCACA-CGTCTTGAGTGTGTCATAGATACCCT 6542 Query 63556 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63615 | || ||||| || |||||| | | || ||| |||| ||| | || | Sbjct 6543 CAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCTTGTGGTGTAC 6602 Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63675 | ||||| || | || || || ||||| || || |||| ||| | || ||||| | Sbjct 6603 CAGCATTGAAGAGCGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATG 6662 Query 63676 TCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 |||| || | || |||||| || | ||||| || || || |||||||| | |||| Sbjct 6663 TCTCGATTGTCTTCTCAATATCCTCACCG-TGAATGCCCACGGCAACACGCATAATCATG 6721 Query 63735 TGCTGAGGTCTTTCAACGATCTTG 63758 ||||| || || ||| | | |||| Sbjct 6722 TGCTGTGGCCTCTCAGCAACCTTG 6745 >seq59 Length=149784 Score = 131 bits (144), Expect = 2e-25 Identities = 365/554 (66%), Gaps = 7/554 (1%) Strand=Plus/Minus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 ||| || || | |||||||| || | ||||| || ||||| || || || |||||| | Sbjct 66101 CATGACACCAGTCTTTTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCTGC 66042 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119 ||| || || || |||||||| || || || |||| || || | || | | | Sbjct 66041 CAAGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGCCGACTTGTAG-TACTTCTCGTTAC 65983 Query 33120 CAATTCAGAA-ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33178 | | ||| | || || || |||||||| || || ||| ||||||| | | Sbjct 65982 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 65923 Query 33179 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 33238 |||| || | || | ||||| ||| |||| || || ||||| || ||| || | Sbjct 65922 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAGGAACTCTTGCTCGATGCTGACAG 65863 Query 33239 CATCTGTTATAATAGATCTAACGGT-TTCTTCACTCGGTGGATGCAATAAATGTTTAAAC 33297 | || || || | | |||| ||||| | || || | | | || || Sbjct 65862 CCTCGGTAATGACGTCTTGGACGGCCTTCTTGCTTGGGCGGTGTCTA-AGGTGGGAGAAG 65804 Query 33298 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAAC 33357 | | || ||||| || ||| ||||||||||| | || || |||||||| || Sbjct 65803 AGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAG 65744 Query 33358 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAA 33417 || || || | ||| || |||||||| || ||||| || ||||| ||||| || || || Sbjct 65743 GTCAGGCCAGCCATGAGACCACGCTTCTTCAGCCAGAAAATGGAGGCGAAGGAACCGGAG 65684 Query 33418 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTG 33474 |||||||| || || || || || ||||||| || | || | || || | || Sbjct 65683 AAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAGTCCTTG 65624 Query 33475 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33534 || || |||||| | ||||| ||||||||||| || | ||||| || || || ||| Sbjct 65623 TCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATG 65564 Query 33535 GCATTAAAGAGATA 33548 ||||| ||||| || Sbjct 65563 GCATTGAAGAGGTA 65550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622940534464960