Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq59 120 4e-22 >seq59 Length=149784 Score = 120 bits (132), Expect = 4e-22 Identities = 366/560 (65%), Gaps = 12/560 (2%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| || ||| ||||||||||| | || | |||||||| || || || Sbjct 65797 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGG 65738 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || | ||| || |||||||| || ||||| || ||||| || || || || || ||||| Sbjct 65737 CCAGCCATGAGACCACGCTTCTTCAGCCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAG 65678 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 32837 || || || || || || ||||||| || | || | || || | |||| || Sbjct 65677 ATACCCTCAACGGCGGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAGTCCTTGTCTTGG 65618 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 |||||| | ||||| ||||||||||| || | ||||| || ||||| || ||||| Sbjct 65617 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 65558 Query 32898 AAGAGATAGtttttttCA--TTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 32955 ||||| || | || | || | || || | ||||| || || | || || Sbjct 65557 AAGAGGTATGTGCGTTGAGCTTGC--TCCTTGATGTATGTGTCGATGAGGAGGGAGTATG 65500 Query 32956 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAA 33015 | || | |||||||| || || ||||| || ||||||||||| | || || | | Sbjct 65499 TCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 65440 Query 33016 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 33075 | || || || | | || || || | || || || || ||||||||| || | Sbjct 65439 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGG 65380 Query 33076 CAAAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTG-TTAGTTTATTC 33131 | || || || | || || || || || | ||||| | || | || ||| Sbjct 65379 CGAAGAAAGCGAGAACGTGGGAAATGAAGTAGCGCTCATCGTC-GTTGAGGCGGTTGTTC 65321 Query 33132 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 33191 || || | | || || || | ||| | || || ||||||| || || ||||| ||| Sbjct 65320 CAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACGCCTCGGCC 65261 Query 33192 TTTTTATACATATTCCAGAT 33211 || || ||||| | |||||| Sbjct 65260 TTCTTGTACATCTGCCAGAT 65241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633625220137600