Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq168 122 7e-23 >seq168 Length=66023 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| ||||| | || || || || |||||||||||||| Sbjct 53833 ATACCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAATCC 53774 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||| || | || |||||||| |||| || ||||| ||||||||| Sbjct 53773 GACAGGGTGCGGCCATCCTCCAACTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGA 53714 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| |||||| || | | |||| ||| || | ||||| Sbjct 53713 GGAATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCC 53654 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| ||||| || ||||| || |||||||||||||| Sbjct 53653 ACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 53604 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| | ||| | |||||| || || || ||||||||||| Sbjct 54061 ATACCACCACGGAGGCGGAGAACAAGATGCAACGTAGACTCCTTCTGGATGTTGTAATCA 54002 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| ||||||||| || || || ||| | || || ||||| |||||||| Sbjct 54001 GACAGGGTACGGCCATCTTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 53942 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || || || ||||| || | | || | ||| || | |||||| Sbjct 53941 GGGATGCCCTCCTTATCTTGGATCTTGGACTTGACGTTATCGATGGTATCCGACGATTCG 53882 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || ||||| || || || || ||||| ||||| Sbjct 53881 ACTTCCAGCGTAATTGTCTTTCCGGTAAGGGTCTTGACGAAAATTTGCAT 53832 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || || || || ||||||||||| ||| Sbjct 53605 ATACCACCACGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCG 53546 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| || ||||| || || || ||| | || || ||||| ||||||||| Sbjct 53545 GAGAGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGA 53486 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | |||||||| || || Sbjct 53485 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCA 53426 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || ||||| || || || || || || |||||||| Sbjct 53425 ACCTCCAAAGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 53376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420130016947872