Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2003VT05_20[genbank_20GCA_5F001662645.1_20201 6-06-24] 856 sequences; 33,292,581 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq168 87.8 1e-12 >seq168 Length=66023 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || || |||| ||| || || ||||||||||||||||||||| | || || Sbjct 53821 AGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGACAGGGTGCGG 53762 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || ||||| ||||| || ||||| |||||||||||||| ||| || | | ||| Sbjct 53761 CCATCCTCCAACTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCC 53702 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089 |||||| ||| || ||| | | | | |||||| ||||| || | ||| Sbjct 53701 TTGTCCTGAATCTTCGACTTGACGTTATCAATGGTATCAGATGATTCCACCTCAAGCGTA 53642 Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || || || || || || || || ||||| || ||||| Sbjct 53641 ATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 53604 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || || || ||||| | ||| ||||||||| ||||||||||| | || || Sbjct 54049 AGGCGGAGAACAAGATGCAACGTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGG 53990 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || || | |||||||| || || |||||||||||||| ||| || | || ||| Sbjct 53989 CCATCTTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCC 53930 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089 || || || || ||| | | | | |||| | |||||| ||| | ||| Sbjct 53929 TTATCTTGGATCTTGGACTTGACGTTATCGATGGTATCCGACGATTCGACTTCCAGCGTA 53870 Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||||| |||||||| || || || || || |||||||| Sbjct 53869 ATTGTCTTTCCGGTAAGGGTCTTGACGAAAATTTGCAT 53832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397058257646512